RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 RELAQ04206 551 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 RAPSNQ13702 412 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 PRTGQ2VWP7 1150 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 TEDDM1Q5T9Z0 273 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 ZNF425Q6IV72 752 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 HIBCHQ6NVY1 386 aaPredicted RBP14.39□□□□□ -0.11
LIG1-215ENST00000597901 PAQR3Q6TCH7 311 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 KIAA0408Q6ZU52 694 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 HPS6Q86YV9 775 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 CNTN4Q8IWV2 1026 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 MCOLN3Q8TDD5 553 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 COL26A1Q96A83 441 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 MIB2Q96AX9 1013 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 CERS2Q96G23 380 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 OR2A5Q96R48 311 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 SPSB2Q99619 263 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 SMAD5Q99717 465 aaKnown RBP14.39□□□□□ -0.11
LIG1-215ENST00000597901 ATP13A2Q9NQ11 1180 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 UTP6Q9NYH9 597 aaKnown RBP14.39□□□□□ -0.11
LIG1-215ENST00000597901 CCDC188H7C350 402 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 AGPSO00116 658 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 TTI1O43156 1089 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 DPM1O60762 260 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 IMPA1P29218 277 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 RGS4P49798 205 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 ITGA8P53708 1063 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 EMP3P54852 163 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 CDKN2DP55273 166 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 MUM1Q2TAK8 710 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 RBM20Q5T481 1227 aaKnown RBP14.38□□□□□ -0.11
LIG1-215ENST00000597901 PRMT9Q6P2P2 845 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 SHISA6Q6ZSJ9 500 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 ATCAYQ86WG3 371 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 GALNT16Q8N428 558 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 CLEC1AQ8NC01 280 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 CFAP36Q96G28 342 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 CCDC138Q96M89 665 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 TRIM51Q9BSJ1 452 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 MFRPQ9BY79 579 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 SOX17Q9H6I2 414 aaPredicted RBP14.38□□□□□ -0.11
LIG1-215ENST00000597901 SYNPO2LQ9H987 977 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 PPANQ9NQ55 473 aaKnown RBP14.38□□□□□ -0.11
LIG1-215ENST00000597901 C5AR2Q9P296 337 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 RNF14Q9UBS8 474 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 CDC23Q9UJX2 597 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 ADAMTS6Q9UKP5 1117 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 CDC14AQ9UNH5 594 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 PDE10AQ9Y233 779 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 VWA7Q9Y334 891 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 TEX264Q9Y6I9 313 aa14.38□□□□□ -0.11
LIG1-215ENST00000597901 TENM4Q6N022 2769 aa14.37□□□□□ -0.11
LIG1-215ENST00000597901 H7BY64 318 aa14.37□□□□□ -0.11
LIG1-215ENST00000597901 SLC16A5O15375 505 aa14.37□□□□□ -0.11
LIG1-215ENST00000597901 CD97P48960 835 aa14.37□□□□□ -0.11
LIG1-215ENST00000597901 MYBPC3Q14896 1274 aa14.37□□□□□ -0.11
LIG1-215ENST00000597901 THEMIS2Q5TEJ8 643 aa14.37□□□□□ -0.11
LIG1-215ENST00000597901 LRRC8EQ6NSJ5 796 aa14.37□□□□□ -0.11
LIG1-215ENST00000597901 JMJD6Q6NYC1 403 aaPredicted RBP14.37□□□□□ -0.11
LIG1-215ENST00000597901 TRMT10BQ6PF06 316 aaKnown RBP14.37□□□□□ -0.11
LIG1-215ENST00000597901 KIRREL2Q6UWL6 708 aa14.37□□□□□ -0.11
LIG1-215ENST00000597901 GALNT7Q86SF2 657 aa14.37□□□□□ -0.11
LIG1-215ENST00000597901 PALM2Q8IXS6 379 aa14.37□□□□□ -0.11
LIG1-215ENST00000597901 CSNK1A1LQ8N752 337 aa14.37□□□□□ -0.11
LIG1-215ENST00000597901 RBMXL3Q8N7X1 1067 aaKnown RBP14.37□□□□□ -0.11
LIG1-215ENST00000597901 LRRC39Q96DD0 335 aa14.37□□□□□ -0.11
LIG1-215ENST00000597901 CABS1Q96KC9 395 aa14.37□□□□□ -0.11
LIG1-215ENST00000597901 C10orf90Q96M02 699 aa14.37□□□□□ -0.11
LIG1-215ENST00000597901 PRAP1Q96NZ9 151 aa14.37□□□□□ -0.11
LIG1-215ENST00000597901 ZNF552Q9H707 407 aaPredicted RBP14.37□□□□□ -0.11
LIG1-215ENST00000597901 PARVBQ9HBI1 364 aa14.37□□□□□ -0.11
LIG1-215ENST00000597901 TMEM184CQ9NVA4 438 aa14.37□□□□□ -0.11
LIG1-215ENST00000597901 SLC17A6Q9P2U8 582 aa14.37□□□□□ -0.11
LIG1-215ENST00000597901 CTSFQ9UBX1 484 aa14.37□□□□□ -0.11
LIG1-215ENST00000597901 NXT1Q9UKK6 140 aaKnown RBP14.37□□□□□ -0.11
LIG1-215ENST00000597901 CHMP2BQ9UQN3 213 aa14.37□□□□□ -0.11
LIG1-215ENST00000597901 FLNBO75369 2602 aaKnown RBP14.36□□□□□ -0.11
LIG1-215ENST00000597901 ASH1LQ9NR48 2969 aaKnown RBP14.36□□□□□ -0.11
LIG1-215ENST00000597901 SOCS6O14544 535 aa14.36□□□□□ -0.11
LIG1-215ENST00000597901 FANCGO15287 622 aa14.36□□□□□ -0.11
LIG1-215ENST00000597901 TP73O15350 636 aa14.36□□□□□ -0.11
LIG1-215ENST00000597901 KLHL41O60662 606 aa14.36□□□□□ -0.11
LIG1-215ENST00000597901 SEC31AO94979 1220 aaKnown RBP14.36□□□□□ -0.11
LIG1-215ENST00000597901 C8GP07360 202 aa14.36□□□□□ -0.11
LIG1-215ENST00000597901 ZGLP1P0C6A0 271 aa14.36□□□□□ -0.11
LIG1-215ENST00000597901 ARL4CP56559 192 aa14.36□□□□□ -0.11
LIG1-215ENST00000597901 OCA2Q04671 838 aa14.36□□□□□ -0.11
LIG1-215ENST00000597901 HIF1AQ16665 826 aa14.36□□□□□ -0.11
LIG1-215ENST00000597901 HKDC1Q2TB90 917 aa14.36□□□□□ -0.11
LIG1-215ENST00000597901 VWA5B1Q5TIE3 1220 aa14.36□□□□□ -0.11
LIG1-215ENST00000597901 STEAP4Q687X5 459 aa14.36□□□□□ -0.11
LIG1-215ENST00000597901 ADCK2Q7Z695 626 aa14.36□□□□□ -0.11
LIG1-215ENST00000597901 PLD3Q8IV08 490 aa14.36□□□□□ -0.11
LIG1-215ENST00000597901 ANKMY2Q8IV38 441 aa14.36□□□□□ -0.11
LIG1-215ENST00000597901 MYO1HQ8N1T3 1032 aa14.36□□□□□ -0.11
LIG1-215ENST00000597901 STT3BQ8TCJ2 826 aa14.36□□□□□ -0.11
LIG1-215ENST00000597901 RERGQ96A58 199 aaPredicted RBP14.36□□□□□ -0.11
LIG1-215ENST00000597901 MIEF2Q96C03 454 aa14.36□□□□□ -0.11
LIG1-215ENST00000597901 SNF8Q96H20 258 aa14.36□□□□□ -0.11
LIG1-215ENST00000597901 KRT12Q99456 494 aa14.36□□□□□ -0.11
LIG1-215ENST00000597901 WDR83Q9BRX9 315 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms