RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 WISP3O95389 354 aaPredicted RBP16.02■□□□□ 0.16
SSBP4-204ENST00000597724 RAB40ALP0C0E4 278 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 ECHS1P30084 290 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 ARSFP54793 590 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 VSX2P58304 361 aaPredicted RBP16.02■□□□□ 0.16
SSBP4-204ENST00000597724 TBPL1P62380 186 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 RELAQ04206 551 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 NAB1Q13506 487 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 NAE1Q13564 534 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 USP10Q14694 798 aaKnown RBP16.02■□□□□ 0.16
SSBP4-204ENST00000597724 ZXDCQ2QGD7 858 aaPredicted RBP16.02■□□□□ 0.16
SSBP4-204ENST00000597724 LINC00303Q3SY05 128 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 TAF1BQ53T94 588 aaPredicted RBP16.02■□□□□ 0.16
SSBP4-204ENST00000597724 C1orf189Q5VU69 101 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 C16orf46Q6P387 395 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 SBSNQ6UWP8 590 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 PROKR1Q8TCW9 393 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 CATSPER2Q96P56 530 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 GBP5Q96PP8 586 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 SGPP1Q9BX95 441 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 PCBD2Q9H0N5 130 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 ATG10Q9H0Y0 220 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 STARD5Q9NSY2 213 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 TXLNGQ9NUQ3 528 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 ARL15Q9NXU5 204 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 NINJ2Q9NZG7 142 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 FER1L5A0AVI2 2057 aa16.02■□□□□ 0.15
SSBP4-204ENST00000597724 LOC105369274A0A096LPK9 316 aa16.01■□□□□ 0.15
SSBP4-204ENST00000597724 LOC102723532A0A0G2JNH3 316 aa16.01■□□□□ 0.15
SSBP4-204ENST00000597724 FITM1A5D6W6 292 aa16.01■□□□□ 0.15
SSBP4-204ENST00000597724 PABPN1LA6NDY0 278 aaKnown RBP16.01■□□□□ 0.15
SSBP4-204ENST00000597724 CDC7O00311 574 aa16.01■□□□□ 0.15
SSBP4-204ENST00000597724 FURINP09958 794 aa16.01■□□□□ 0.15
SSBP4-204ENST00000597724 AGXTP21549 392 aa16.01■□□□□ 0.15
SSBP4-204ENST00000597724 CCND1P24385 295 aa16.01■□□□□ 0.15
SSBP4-204ENST00000597724 RPS18P62269 152 aaKnown RBP16.01■□□□□ 0.15
SSBP4-204ENST00000597724 DCDP81605 110 aaKnown RBP16.01■□□□□ 0.15
SSBP4-204ENST00000597724 COL9A2Q14055 689 aaPredicted RBP16.01■□□□□ 0.15
SSBP4-204ENST00000597724 ERV3-1Q14264 604 aa16.01■□□□□ 0.15
SSBP4-204ENST00000597724 GRM7Q14831 915 aa16.01■□□□□ 0.15
SSBP4-204ENST00000597724 EFTUD2Q15029 972 aaKnown RBP eCLIP16.01■□□□□ 0.152e-6■■■■■ 37.2
SSBP4-204ENST00000597724 ZKSCAN8Q15776 578 aaPredicted RBP16.01■□□□□ 0.15
SSBP4-204ENST00000597724 WASHC2DQ5SRD0 308 aa16.01■□□□□ 0.15
SSBP4-204ENST00000597724 ATP1A1-AS1Q5TC04 95 aa16.01■□□□□ 0.15
SSBP4-204ENST00000597724 YOD1Q5VVQ6 348 aaPredicted RBP16.01■□□□□ 0.15
SSBP4-204ENST00000597724 PRAMEF13Q5VWM6 474 aa16.01■□□□□ 0.15
SSBP4-204ENST00000597724 FAM198BQ6UWH4 519 aa16.01■□□□□ 0.15
SSBP4-204ENST00000597724 OR4N4Q8N0Y3 316 aa16.01■□□□□ 0.15
SSBP4-204ENST00000597724 SLC39A7Q92504 469 aa16.01■□□□□ 0.15
SSBP4-204ENST00000597724 FBXL8Q96CD0 374 aa16.01■□□□□ 0.15
SSBP4-204ENST00000597724 MED8Q96G25 268 aa16.01■□□□□ 0.15
SSBP4-204ENST00000597724 FMO2Q99518 471 aa16.01■□□□□ 0.15
SSBP4-204ENST00000597724 CUEDC1Q9NWM3 386 aaPredicted RBP16.01■□□□□ 0.15
SSBP4-204ENST00000597724 UTP6Q9NYH9 597 aaKnown RBP16.01■□□□□ 0.15
SSBP4-204ENST00000597724 SMG1Q96Q15 3661 aaKnown RBP16.01■□□□□ 0.15
SSBP4-204ENST00000597724 NPEPPSL1A6NEC2 478 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 H7BY64 318 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 PHGDHO43175 533 aaKnown RBP16■□□□□ 0.15
SSBP4-204ENST00000597724 GUCA1CO95843 209 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 EZRP15311 586 aaKnown RBP16■□□□□ 0.15
SSBP4-204ENST00000597724 NPPBP16860 134 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 STMN1P16949 149 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 HRH2P25021 359 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 PHBP35232 272 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 FAM214AQ32MH5 1076 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 NKAIN1Q4KMZ8 207 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 UBAP2Q5T6F2 1119 aaKnown RBP16■□□□□ 0.15
SSBP4-204ENST00000597724 BORAQ6PGQ7 559 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 LCTLQ6UWM7 567 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 TTLL10Q6ZVT0 673 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 SYVN1Q86TM6 617 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 ENDOVQ8N8Q3 282 aaKnown RBP16■□□□□ 0.15
SSBP4-204ENST00000597724 TTC29Q8NA56 475 aaPredicted RBP16■□□□□ 0.15
SSBP4-204ENST00000597724 OR56A3Q8NH54 315 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 ATL1Q8WXF7 558 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 PRAP1Q96NZ9 151 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 OR2A5Q96R48 311 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 CYTH2Q99418 400 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 C17orf62Q9BQA9 187 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 DERL2Q9GZP9 239 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 CDC42EP4Q9H3Q1 356 aaKnown RBP16■□□□□ 0.15
SSBP4-204ENST00000597724 CUTCQ9NTM9 273 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 TMEM184CQ9NVA4 438 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 CTNNAL1Q9UBT7 734 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 TCFL5Q9UL49 500 aa16■□□□□ 0.15
SSBP4-204ENST00000597724 A0A1B0GX78 115 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 C9J4A7 227 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 H0YGG7 62 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 HAT1O14929 419 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 DSCR3O14972 297 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 EIF2S1P05198 315 aaKnown RBP15.99■□□□□ 0.15
SSBP4-204ENST00000597724 CCDC166P0CW27 439 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 ALAS2P22557 587 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 RAB10P61026 200 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 ARF3P61204 181 aaPredicted RBP15.99■□□□□ 0.15
SSBP4-204ENST00000597724 CDKL1Q00532 357 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 NFKB2Q00653 900 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 LY6DQ14210 128 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 NCF4Q15080 339 aa15.99■□□□□ 0.15
SSBP4-204ENST00000597724 TSNQ15631 228 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms