RNA–Protein interactions for RNA: ENST00000596271.1

SAMD4B-204, Transcript of sterile alpha motif domain containing 4B, humanhuman

Gene SAMD4B, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-204ENST00000596271 V9GYY5 206 aaPredicted RBP11.33□□□□□ -0.6
SAMD4B-204ENST00000596271 CENPEQ02224 2701 aa11.33□□□□□ -0.6
SAMD4B-204ENST00000596271 CACNA1DQ01668 2161 aa11.33□□□□□ -0.6
SAMD4B-204ENST00000596271 DIDO1Q9BTC0 2240 aaKnown RBP11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 ITPR2Q14571 2701 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 A0A1B0GX78 115 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 FITM1A5D6W6 292 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 CD3EAPO15446 510 aaKnown RBP11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 NDUFS3O75489 264 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 CBSLP0DN79 551 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 PVRP15151 417 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 CD9P21926 228 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 NMBRP28336 390 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 ECHS1P30084 290 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 OTX2P32243 289 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 CBSP35520 551 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 TRADDQ15628 312 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 ZIC1Q15915 447 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 PLEKHN1Q494U1 663 aaPredicted RBP11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 MSS51Q4VC12 460 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 LGSNQ5TDP6 509 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 IRAK1BP1Q5VVH5 260 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 MAMDC2Q7Z304 686 aaPredicted RBP11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 GALNT7Q86SF2 657 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 SLC26A11Q86WA9 606 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 MCATQ8IVS2 390 aaKnown RBP11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 SLC34A3Q8N130 599 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 OR2L8Q8NGY9 312 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 MAGEC3Q8TD91 643 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 PPP4R1Q8TF05 950 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 RAD51AP1Q96B01 352 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 SNRNP40Q96DI7 357 aaKnown RBP11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 PANX3Q96QZ0 392 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 SPRTNQ9H040 489 aaPredicted RBP11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 CCDC68Q9H2F9 335 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 XKR8Q9H6D3 395 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 SEMA3GQ9NS98 782 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 CORO1CQ9ULV4 474 aaPredicted RBP11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 COMMD10Q9Y6G5 202 aa11.32□□□□□ -0.6
SAMD4B-204ENST00000596271 TNRC6AQ8NDV7 1962 aaKnown RBP11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 ZCWPW2A0A1B0GU75 182 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 CCDC162PA2VCL2 907 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 A6NL46 340 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 ISM1B1AKI9 464 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 CCL22O00626 93 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 PRMT5O14744 637 aaPredicted RBP11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 DSCR3O14972 297 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 SEMA7AO75326 666 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 GOT2P00505 430 aaKnown RBP11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 TPBGLP0DKB5 382 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 FDXRP22570 491 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 PKLRP30613 574 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 CCNFP41002 786 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 TSFMP43897 325 aaKnown RBP11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 RELAQ04206 551 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 ELOAQ14241 798 aaKnown RBP11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 TMED2Q15363 201 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 HP1BP3Q5SSJ5 553 aaPredicted RBP11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 AGAP7PQ5VUJ5 663 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 PRMT9Q6P2P2 845 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 PPP1R32Q7Z5V6 425 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 LURAP1LQ8IV03 231 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 ZNF655Q8N720 491 aaPredicted RBP11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 LMNTD1Q8N9Z9 388 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 ST6GALNAC3Q8NDV1 305 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 AENQ8WTP8 325 aaKnown RBP11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 UBLCP1Q8WVY7 318 aaPredicted RBP11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 RNF31Q96EP0 1072 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 C5orf34Q96MH7 638 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 AGAP4Q96P64 663 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 LMF1Q96S06 567 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 MENTQ9BUN1 341 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 ILKAPQ9H0C8 392 aaPredicted RBP11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 CDC42EP4Q9H3Q1 356 aaKnown RBP11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 SPHK1Q9NYA1 384 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 MOCS1Q9NZB8 636 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 FETUBQ9UGM5 382 aa11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 COPG1Q9Y678 874 aaKnown RBP11.31□□□□□ -0.6
SAMD4B-204ENST00000596271 ANKUB1A6NFN9 424 aa11.3□□□□□ -0.6
SAMD4B-204ENST00000596271 VSTM2BA6NLU5 285 aa11.3□□□□□ -0.6
SAMD4B-204ENST00000596271 LDLRP01130 860 aa11.3□□□□□ -0.6
SAMD4B-204ENST00000596271 UMODP07911 640 aa11.3□□□□□ -0.6
SAMD4B-204ENST00000596271 RPS3P23396 243 aaKnown RBP eCLIP11.3□□□□□ -0.6
SAMD4B-204ENST00000596271 CNTFP26441 200 aa11.3□□□□□ -0.6
SAMD4B-204ENST00000596271 AOAHP28039 575 aa11.3□□□□□ -0.6
SAMD4B-204ENST00000596271 ADARP55265 1226 aaKnown RBP11.3□□□□□ -0.6
SAMD4B-204ENST00000596271 EIF3BP55884 814 aaKnown RBP11.3□□□□□ -0.6
SAMD4B-204ENST00000596271 PER3P56645 1201 aa11.3□□□□□ -0.6
SAMD4B-204ENST00000596271 AP2B1P63010 937 aa11.3□□□□□ -0.6
SAMD4B-204ENST00000596271 EIF2S3LQ2VIR3 472 aaKnown RBP11.3□□□□□ -0.6
SAMD4B-204ENST00000596271 PRAMEF13Q5VWM6 474 aa11.3□□□□□ -0.6
SAMD4B-204ENST00000596271 ZNF470Q6ECI4 717 aa11.3□□□□□ -0.6
SAMD4B-204ENST00000596271 RPUSD3Q6P087 351 aaKnown RBP11.3□□□□□ -0.6
SAMD4B-204ENST00000596271 CILP2Q8IUL8 1156 aa11.3□□□□□ -0.6
SAMD4B-204ENST00000596271 CNTN4Q8IWV2 1026 aa11.3□□□□□ -0.6
SAMD4B-204ENST00000596271 MREGQ8N565 214 aa11.3□□□□□ -0.6
SAMD4B-204ENST00000596271 TTC29Q8NA56 475 aaPredicted RBP11.3□□□□□ -0.6
SAMD4B-204ENST00000596271 NAT14Q8WUY8 206 aa11.3□□□□□ -0.6
SAMD4B-204ENST00000596271 MVB12AQ96EY5 273 aa11.3□□□□□ -0.6
SAMD4B-204ENST00000596271 PWWP2AQ96N64 755 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms