RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 CTSVO60911 334 aa16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 WISP3O95389 354 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 RAB40ALP0C0E4 278 aa16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 PIM1P11309 404 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 EZRP15311 586 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 RORAP35398 523 aa16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 MSH2P43246 934 aa16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 SERPINB9P50453 376 aa16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 VSX2P58304 361 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 EFTUD2Q15029 972 aaKnown RBP eCLIP16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 PPP1R3AQ16821 1122 aa16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 CRTC2Q53ET0 693 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 WASHC2DQ5SRD0 308 aa16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 FBXO42Q6P3S6 717 aa16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 MBOAT1Q6ZNC8 495 aa16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 PAQR7Q86WK9 346 aa16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 SLC38A9Q8NBW4 561 aa16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 OR56A3Q8NH54 315 aa16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 RERGQ96A58 199 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 ZNF285Q96NJ3 590 aa16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 CATSPER2Q96P56 530 aa16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 CHST8Q9H2A9 424 aa16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 NMRAL1Q9HBL8 299 aa16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 FARSAQ9Y285 508 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 ACOT9Q9Y305 439 aa16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 CFAP47Q6ZTR5 3102 aa16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 A0A087X1B8 175 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 ESPNB1AK53 854 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 C9J4A7 227 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 H7BY64 318 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 KRT38O76015 456 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 ABHD2P08910 425 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 CD1DP15813 335 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 ALAS2P22557 587 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 CNTFP26441 200 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 GRK3P35626 688 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 PMS2P54278 862 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 DCDP81605 110 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 CSHL1Q14406 222 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 TSNQ15631 228 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 CDKL4Q5MAI5 379 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 LGSNQ5TDP6 509 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 MROH9Q5TGP6 573 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 ZNF425Q6IV72 752 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 FAM199XQ6PEV8 388 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 ZNF517Q6ZMY9 492 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 GPSM1Q86YR5 675 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 CNPY4Q8N129 248 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 TCAIMQ8N3R3 496 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 SLC44A1Q8WWI5 657 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 STARD8Q92502 1023 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 UBXN10Q96LJ8 280 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 PRAP1Q96NZ9 151 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 UBL7Q96S82 380 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 NLNQ9BYT8 704 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 IL17BQ9UHF5 180 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 GPN3Q9UHW5 284 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 DYRK1BQ9Y463 629 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 ZZEF1O43149 2961 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 ADAMTS20P59510 1910 aa16.55■□□□□ 0.24
SHKBP1-212ENST00000596163 IGKV1-8A0A0C4DH67 115 aa16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 CCDC189A1A4V9 331 aa16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 FITM1A5D6W6 292 aa16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 TERTO14746 1132 aaKnown RBP16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 S100BP04271 92 aaPredicted RBP16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 ITGB2P05107 769 aa16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 EIF2S1P05198 315 aaKnown RBP16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 NPPBP16860 134 aa16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 WT1P19544 449 aaPredicted RBP16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 PTPN4P29074 926 aa16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 TYK2P29597 1187 aa16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 SERPINB8P50452 374 aa16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 EMP3P54852 163 aa16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 YBX1P67809 324 aaKnown RBP16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 TAF1BQ53T94 588 aaPredicted RBP16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 SPATA6LQ8N4H0 392 aa16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 TBC1D19Q8N5T2 526 aa16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 LSM14AQ8ND56 463 aaKnown RBP16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 STAG3L4Q8TBR4 150 aa16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 KIAA1191Q96A73 305 aa16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 THAP11Q96EK4 314 aa16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 DHRS4Q9BTZ2 278 aa16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 CUTCQ9NTM9 273 aa16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 NDOR1Q9UHB4 597 aa16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 IKZF3Q9UKT9 509 aa16.54■□□□□ 0.24
SHKBP1-212ENST00000596163 ZFHX4Q86UP3 3567 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 A0A1B0GX78 115 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 POC1B-GALNT4F8VUJ3 575 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 H0YGG7 62 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 ERVH48-1M5A8F1 160 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 NKX2-8O15522 239 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 CREG1O75629 220 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 LTA4HP09960 611 aaKnown RBP16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 SLC35E2BP0CK96 405 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 F8A1P23610 371 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 CCR8P51685 355 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 ARF3P61204 181 aaPredicted RBP16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 RPS15AP62244 130 aaKnown RBP16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 TGFBIQ15582 683 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms