RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 FDXRP22570 491 aa13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 EMP2P54851 167 aa13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 ALDH6A1Q02252 535 aaKnown RBP13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 MSLNQ13421 630 aaPredicted RBP13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 RPS6KA1Q15418 735 aa13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 OASLQ15646 514 aaKnown RBP13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 KRTCAP3Q53RY4 240 aa13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 KCTD11Q693B1 232 aa13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 FCRLBQ6BAA4 426 aa13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 DENND5AQ6IQ26 1287 aa13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 CEP128Q6ZU80 1094 aa13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 SLC13A5Q86YT5 568 aaPredicted RBP13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 CHERPQ8IWX8 916 aaKnown RBP13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 OR13C4Q8NGS5 318 aa13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 DENND1AQ8TEH3 1009 aa13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 TBL1YQ9BQ87 522 aa13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 REPIN1Q9BWE0 567 aaKnown RBP13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 RNF32Q9H0A6 362 aa13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 ZNF282Q9UDV7 671 aaPredicted RBP13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 INTS1Q8N201 2190 aaKnown RBP13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 KIAA1324LA8MWY0 1029 aaPredicted RBP13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 E9PLN8 166 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 ASNA1O43681 348 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 ACADLP28330 430 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 VSX2P58304 361 aaPredicted RBP13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 RPA4Q13156 261 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 SPARCL1Q14515 664 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 KIR2DS3Q14952 304 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 TAF1AQ15573 450 aaPredicted RBP13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 PARP6Q2NL67 630 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 WASHC2DQ5SRD0 308 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 ZNF449Q6P9G9 518 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 FGD2Q7Z6J4 655 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 TAX1BP1Q86VP1 789 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 DMRTC2Q8IXT2 367 aaPredicted RBP13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 LINC01555Q8NAE3 123 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 TRIM58Q8NG06 486 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 PHF10Q8WUB8 498 aaKnown RBP13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 SIGLEC12Q96PQ1 595 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 VKORC1Q9BQB6 163 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 SELENOSQ9BQE4 189 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 TRIM51Q9BSJ1 452 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 FRMD8P1Q9BZ68 369 aaPredicted RBP13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 ARNT2Q9HBZ2 717 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 ANKRD10Q9NXR5 420 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 COQ3Q9NZJ6 369 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 IL1RAPL1Q9NZN1 696 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 PPP2R2CQ9Y2T4 447 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 GTF3C1Q12789 2109 aa13.06□□□□□ -0.32
SHKBP1-208ENST00000595726 CSPG4Q6UVK1 2322 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 HYKKA2RU49 373 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 C2orf81A6NN90 581 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 FAM90A27PA6NNH2 459 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 IDSB3KWA1 339 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 CFAP99D6REC4 459 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 TTI1O43156 1089 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 MYBL2P10244 700 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 CXCR2P25025 360 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 TFF3Q07654 80 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 SIX1Q15475 284 aaPredicted RBP13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 FAM214AQ32MH5 1076 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 P3H1Q32P28 736 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 FRMPD2BQ6IN97 320 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 FIGLAQ6QHK4 219 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 RIPOR1Q6ZS17 1223 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 TAOK1Q7L7X3 1001 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 PRIMA1Q86XR5 153 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 SIAH3Q8IW03 269 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 TBC1D21Q8IYX1 336 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 TAB3Q8N5C8 712 aaPredicted RBP13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 TTC29Q8NA56 475 aaPredicted RBP13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 C1orf54Q8WWF1 131 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 LRRC45Q96CN5 670 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 ZNF285Q96NJ3 590 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 YIPF2Q9BWQ6 316 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 LRRC40Q9H9A6 602 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 ZC3H7BQ9UGR2 993 aaKnown RBP13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 POLG2Q9UHN1 485 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 FEZ2Q9UHY8 353 aaPredicted RBP13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 HRH3Q9Y5N1 445 aa13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 FN1P02751 2386 aaKnown RBP13.05□□□□□ -0.32
SHKBP1-208ENST00000595726 CPAMD8Q8IZJ3 1885 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 FITM1A5D6W6 292 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 BHMG1C9JSJ3 638 aaPredicted RBP13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 NRP2O60462 931 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 CTSVO60911 334 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 TOXO94900 526 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 CRTAMO95727 393 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 AP2A1O95782 977 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 FOSL1P15407 271 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 STIP1P31948 543 aaKnown RBP13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 ZNF140P52738 457 aaPredicted RBP13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 EFNA3P52797 238 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 ADAM8P78325 824 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 FOLH1Q04609 750 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 MYBPHQ13203 477 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 PCOLCEQ15113 449 aa13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 ZC3H12BQ5HYM0 836 aaKnown RBP13.04□□□□□ -0.32
SHKBP1-208ENST00000595726 TCTE1Q5JU00 501 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms