RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 FRA10AC1Q70Z53 315 aa13.95□□□□□ -0.18
VRK3-206ENST00000594090 SPATA6LQ8N4H0 392 aa13.95□□□□□ -0.18
VRK3-206ENST00000594090 ATL1Q8WXF7 558 aa13.95□□□□□ -0.18
VRK3-206ENST00000594090 ALKBH8Q96BT7 664 aaKnown RBP13.95□□□□□ -0.18
VRK3-206ENST00000594090 CHST8Q9H2A9 424 aa13.95□□□□□ -0.18
VRK3-206ENST00000594090 ENAMQ9NRM1 1142 aa13.95□□□□□ -0.18
VRK3-206ENST00000594090 DHCR7Q9UBM7 475 aaKnown RBP13.95□□□□□ -0.18
VRK3-206ENST00000594090 KCND3Q9UK17 655 aa13.95□□□□□ -0.18
VRK3-206ENST00000594090 SH2B3Q9UQQ2 575 aa13.95□□□□□ -0.18
VRK3-206ENST00000594090 SPTBP11277 2137 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 HMX2A2RU54 273 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 SRPX2O60687 465 aaPredicted RBP13.94□□□□□ -0.18
VRK3-206ENST00000594090 EZRP15311 586 aaKnown RBP13.94□□□□□ -0.18
VRK3-206ENST00000594090 CD1DP15813 335 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 CRABP2P29373 138 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 GMPRP36959 345 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 VSX2P58304 361 aaPredicted RBP13.94□□□□□ -0.18
VRK3-206ENST00000594090 CYP4F2P78329 520 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 RELAQ04206 551 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 CSHL1Q14406 222 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 MROH9Q5TGP6 573 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 CAPN13Q6MZZ7 669 aaPredicted RBP13.94□□□□□ -0.18
VRK3-206ENST00000594090 FBXO42Q6P3S6 717 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 FAM198BQ6UWH4 519 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 LCTLQ6UWM7 567 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 ADCK2Q7Z695 626 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 GSPT2Q8IYD1 628 aaKnown RBP13.94□□□□□ -0.18
VRK3-206ENST00000594090 PROKR1Q8TCW9 393 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 SLC44A1Q8WWI5 657 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 PYCR2Q96C36 320 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 UBXN10Q96LJ8 280 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 GBP5Q96PP8 586 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 RUFY1Q96T51 708 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 PAFAH2Q99487 392 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 DPH2Q9BQC3 489 aaPredicted RBP13.94□□□□□ -0.18
VRK3-206ENST00000594090 NDC1Q9BTX1 674 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 STARD5Q9NSY2 213 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 TXLNGQ9NUQ3 528 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 RALYQ9UKM9 306 aaKnown RBP13.94□□□□□ -0.18
VRK3-206ENST00000594090 SNX7Q9UNH6 387 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 ANKRD12Q6UB98 2062 aa13.94□□□□□ -0.18
VRK3-206ENST00000594090 HEATR5BQ9P2D3 2071 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 A0A087WUV0 522 aaPredicted RBP13.93□□□□□ -0.18
VRK3-206ENST00000594090 LOC105369274A0A096LPK9 316 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 LOC102723532A0A0G2JNH3 316 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 FITM1A5D6W6 292 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 ESPNB1AK53 854 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 H7BY64 318 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 HAT1O14929 419 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 KATNA1O75449 491 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 INHBAP08476 426 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 ANXA5P08758 320 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 ABHD2P08910 425 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 FAM153BP0C7A2 387 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 PRKAR1AP10644 381 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 AGXTP21549 392 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 CSRP3P50461 194 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 PMS2P54278 862 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 ATP6V0D1P61421 351 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 RHDQ02161 417 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 CDC20Q12834 499 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 COL9A2Q14055 689 aaPredicted RBP13.93□□□□□ -0.18
VRK3-206ENST00000594090 GRM7Q14831 915 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 TGFBIQ15582 683 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 OR4D1Q15615 310 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 FAM153CQ494X1 144 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 C1orf189Q5VU69 101 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 TRMT10CQ7L0Y3 403 aaKnown RBP13.93□□□□□ -0.18
VRK3-206ENST00000594090 C17orf64Q86WR6 236 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 OR4N4Q8N0Y3 316 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 EIF1ADQ8N9N8 165 aaKnown RBP13.93□□□□□ -0.18
VRK3-206ENST00000594090 TTC29Q8NA56 475 aaPredicted RBP13.93□□□□□ -0.18
VRK3-206ENST00000594090 UHMK1Q8TAS1 419 aaKnown RBP13.93□□□□□ -0.18
VRK3-206ENST00000594090 PTERQ96BW5 349 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 PRAP1Q96NZ9 151 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 OR4K3Q96R72 315 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 EGFL8Q99944 293 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 HAUS8Q9BT25 410 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 GPR87Q9BY21 358 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 TXLNGYQ9BZA5 131 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 ACTL8Q9H568 366 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 SYNPO2LQ9H987 977 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 SNX15Q9NRS6 342 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 TMEM184CQ9NVA4 438 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 FER1L5A0AVI2 2057 aa13.93□□□□□ -0.18
VRK3-206ENST00000594090 ITPR1Q14643 2758 aa13.92□□□□□ -0.18
VRK3-206ENST00000594090 H0YGG7 62 aa13.92□□□□□ -0.18
VRK3-206ENST00000594090 NKX2-8O15522 239 aa13.92□□□□□ -0.18
VRK3-206ENST00000594090 RIPK2O43353 540 aa13.92□□□□□ -0.18
VRK3-206ENST00000594090 CAPN1P07384 714 aa13.92□□□□□ -0.18
VRK3-206ENST00000594090 MYBL2P10244 700 aa13.92□□□□□ -0.18
VRK3-206ENST00000594090 NPPBP16860 134 aa13.92□□□□□ -0.18
VRK3-206ENST00000594090 HRH2P25021 359 aa13.92□□□□□ -0.18
VRK3-206ENST00000594090 PTPN4P29074 926 aa13.92□□□□□ -0.18
VRK3-206ENST00000594090 HNMTP50135 292 aa13.92□□□□□ -0.18
VRK3-206ENST00000594090 ARSFP54793 590 aa13.92□□□□□ -0.18
VRK3-206ENST00000594090 ARF3P61204 181 aaPredicted RBP13.92□□□□□ -0.18
VRK3-206ENST00000594090 RPS18P62269 152 aaKnown RBP13.92□□□□□ -0.18
VRK3-206ENST00000594090 RPS15P62841 145 aaKnown RBP13.92□□□□□ -0.18
VRK3-206ENST00000594090 CSNK1G2P78368 415 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms