RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 HIF1AQ16665 826 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 FAM214AQ32MH5 1076 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 TEDDM1Q5T9Z0 273 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 ZNF425Q6IV72 752 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 UGT3A1Q6NUS8 523 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 TRMT10BQ6PF06 316 aaKnown RBP13.26□□□□□ -0.29
APOC1-208ENST00000592535 PAQR3Q6TCH7 311 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 KIAA0408Q6ZU52 694 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 MYO18BQ8IUG5 2567 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 EEF1AKMT1Q8WVE0 214 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 SNF8Q96H20 258 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 IP6K3Q96PC2 410 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 KRT12Q99456 494 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 SPSB2Q99619 263 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 NUDT9Q9BW91 350 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 PPANQ9NQ55 473 aaKnown RBP13.26□□□□□ -0.29
APOC1-208ENST00000592535 P4HTMQ9NXG6 502 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 TAS2R13Q9NYV9 303 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 ADAMTS6Q9UKP5 1117 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 TEX264Q9Y6I9 313 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 MAU2Q9Y6X3 613 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 EFCAB8A8MWE9 144 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 PEX12O00623 359 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 TP73O15350 636 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 ALBP02768 609 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 RGS4P49798 205 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 PGGT1BP53609 377 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 ARL4CP56559 192 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 MRPS25P82663 173 aaKnown RBP13.25□□□□□ -0.29
APOC1-208ENST00000592535 FOXK1P85037 733 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 RAPSNQ13702 412 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 NKG7Q16617 165 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 PRTGQ2VWP7 1150 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 NADK2Q4G0N4 442 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 DCAF10Q5QP82 559 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 THEMIS2Q5TEJ8 643 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 STEAP4Q687X5 459 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 LRRC8EQ6NSJ5 796 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 SHISA6Q6ZSJ9 500 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 GALNT7Q86SF2 657 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 ANKMY2Q8IV38 441 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 LRRC39Q96DD0 335 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 LINGO1Q96FE5 620 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 C10orf90Q96M02 699 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 FER1L6-AS2Q96M78 137 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 SLC26A1Q9H2B4 701 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 SOX17Q9H6I2 414 aaPredicted RBP13.25□□□□□ -0.29
APOC1-208ENST00000592535 WDR54Q9H977 334 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 CUEDC1Q9NWM3 386 aaPredicted RBP13.25□□□□□ -0.29
APOC1-208ENST00000592535 GPR83Q9NYM4 423 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 RNF14Q9UBS8 474 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 CTSFQ9UBX1 484 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 PDE10AQ9Y233 779 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 ZNF451Q9Y4E5 1061 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 DOCK10Q96BY6 2186 aa13.25□□□□□ -0.29
APOC1-208ENST00000592535 HAT1O14929 419 aa13.24□□□□□ -0.29
APOC1-208ENST00000592535 C8GP07360 202 aa13.24□□□□□ -0.29
APOC1-208ENST00000592535 RPL21P46778 160 aaKnown RBP13.24□□□□□ -0.29
APOC1-208ENST00000592535 MLLT10P55197 1068 aa13.24□□□□□ -0.29
APOC1-208ENST00000592535 ABATP80404 500 aa13.24□□□□□ -0.29
APOC1-208ENST00000592535 PDIA2Q13087 525 aaKnown RBP13.24□□□□□ -0.29
APOC1-208ENST00000592535 FASTKD3Q14CZ7 662 aaKnown RBP13.24□□□□□ -0.29
APOC1-208ENST00000592535 MUM1Q2TAK8 710 aa13.24□□□□□ -0.29
APOC1-208ENST00000592535 HKDC1Q2TB90 917 aa13.24□□□□□ -0.29
APOC1-208ENST00000592535 HECTD2Q5U5R9 776 aa13.24□□□□□ -0.29
APOC1-208ENST00000592535 MBOAT1Q6ZNC8 495 aa13.24□□□□□ -0.29
APOC1-208ENST00000592535 ADCK2Q7Z695 626 aa13.24□□□□□ -0.29
APOC1-208ENST00000592535 PLD3Q8IV08 490 aa13.24□□□□□ -0.29
APOC1-208ENST00000592535 MYO1HQ8N1T3 1032 aa13.24□□□□□ -0.29
APOC1-208ENST00000592535 C17orf53Q8N3J3 647 aaPredicted RBP13.24□□□□□ -0.29
APOC1-208ENST00000592535 CSNK1A1LQ8N752 337 aa13.24□□□□□ -0.29
APOC1-208ENST00000592535 GPATCH11Q8N954 259 aa13.24□□□□□ -0.29
APOC1-208ENST00000592535 COL26A1Q96A83 441 aa13.24□□□□□ -0.29
APOC1-208ENST00000592535 CABS1Q96KC9 395 aa13.24□□□□□ -0.29
APOC1-208ENST00000592535 OR2A5Q96R48 311 aa13.24□□□□□ -0.29
APOC1-208ENST00000592535 ZNF304Q9HCX3 659 aa13.24□□□□□ -0.29
APOC1-208ENST00000592535 CCDC177Q9NQR7 707 aaPredicted RBP13.24□□□□□ -0.29
APOC1-208ENST00000592535 G3BP2Q9UN86 482 aaKnown RBP13.24□□□□□ -0.29
APOC1-208ENST00000592535 RUVBL1Q9Y265 456 aaKnown RBP13.24□□□□□ -0.29
APOC1-208ENST00000592535 SNX24Q9Y343 169 aa13.24□□□□□ -0.29
APOC1-208ENST00000592535 PCDHGB7Q9Y5F8 929 aa13.24□□□□□ -0.29
APOC1-208ENST00000592535 H7BY64 318 aa13.23□□□□□ -0.29
APOC1-208ENST00000592535 TSPAN12O95859 305 aa13.23□□□□□ -0.29
APOC1-208ENST00000592535 EZRP15311 586 aaKnown RBP13.23□□□□□ -0.29
APOC1-208ENST00000592535 FDXRP22570 491 aa13.23□□□□□ -0.29
APOC1-208ENST00000592535 MMP11P24347 488 aa13.23□□□□□ -0.29
APOC1-208ENST00000592535 TBPL1P62380 186 aa13.23□□□□□ -0.29
APOC1-208ENST00000592535 SP140Q13342 867 aa13.23□□□□□ -0.29
APOC1-208ENST00000592535 PDAP1Q13442 181 aaKnown RBP13.23□□□□□ -0.29
APOC1-208ENST00000592535 PHKG1Q16816 387 aa13.23□□□□□ -0.29
APOC1-208ENST00000592535 PRAMEF13Q5VWM6 474 aa13.23□□□□□ -0.29
APOC1-208ENST00000592535 PRMT9Q6P2P2 845 aa13.23□□□□□ -0.29
APOC1-208ENST00000592535 CLEC1AQ8NC01 280 aa13.23□□□□□ -0.29
APOC1-208ENST00000592535 FBXO36Q8NEA4 188 aa13.23□□□□□ -0.29
APOC1-208ENST00000592535 MCOLN3Q8TDD5 553 aa13.23□□□□□ -0.29
APOC1-208ENST00000592535 MIB2Q96AX9 1013 aa13.23□□□□□ -0.29
APOC1-208ENST00000592535 CCDC138Q96M89 665 aa13.23□□□□□ -0.29
APOC1-208ENST00000592535 PRAP1Q96NZ9 151 aa13.23□□□□□ -0.29
APOC1-208ENST00000592535 SMAD5Q99717 465 aaKnown RBP13.23□□□□□ -0.29
APOC1-208ENST00000592535 OLFM1Q99784 485 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms