RNA–Protein interactions for RNA: ENST00000590211.5

CAPNS1-210, Transcript of calpain small subunit 1, humanhuman

TSL 5

Gene CAPNS1, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-210ENST00000590211 RBM44Q6ZP01 1051 aaKnown RBP4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 LINC00696Q6ZRV3 163 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 MSANTD1Q6ZTZ1 278 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 HIST3H2AQ7L7L0 130 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 NUP54Q7Z3B4 507 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 SPATA19Q7Z5L4 167 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 GPR142Q7Z601 462 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 ADIPOR2Q86V24 386 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 ZNF410Q86VK4 478 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 CCDC25Q86WR0 208 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 ARID3BQ8IVW6 561 aaPredicted RBP4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 SLC35F3Q8IY50 421 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 KATNAL2Q8IYT4 538 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 ZNF619Q8N2I2 560 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 BBOF1Q8ND07 529 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 RBM15BQ8NDT2 890 aaKnown RBP4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 OR10S1Q8NGN2 331 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 EXD1Q8NHP7 514 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 CFAP61Q8NHU2 1237 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 HUS1BQ8NHY5 278 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 WIPF2Q8TF74 440 aaPredicted RBP4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 ZNF606Q8WXB4 792 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 SNAPC3Q92966 411 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 ZBTB9Q96C00 473 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 ARSGQ96EG1 525 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 RRNAD1Q96FB5 475 aaKnown RBP4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 SLC41A2Q96JW4 573 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 SLITRK1Q96PX8 696 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 FCRL5Q96RD9 977 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 SCNM1Q9BWG6 230 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 TM2D2Q9BX73 214 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 TSPYL1Q9H0U9 437 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 PCED1AQ9H1Q7 454 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 R3HDMLQ9H3Y0 253 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 FAM124BQ9H5Z6 455 aaPredicted RBP4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 ASB7Q9H672 318 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 LRRC19Q9H756 370 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 ACTR5Q9H9F9 607 aaPredicted RBP4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 SLC28A3Q9HAS3 691 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 TMBIM4Q9HC24 238 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 PDGFCQ9NRA1 345 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 MTMR10Q9NXD2 777 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 ASIC3Q9UHC3 531 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 ST6GALNAC2Q9UJ37 374 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 ZNF148Q9UQR1 794 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 LIPT1Q9Y234 373 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 KCNK7Q9Y2U2 307 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 SNX24Q9Y343 169 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 A3GALT2U3KPV4 340 aa4.11□□□□□ -1.75
CAPNS1-210ENST00000590211 A0A0U1RQF3 1178 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 TMEM191CA6NGB0 347 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 ENO4A6NNW6 628 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 MAGEB17A8MXT2 336 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 EIF3HO15372 352 aaKnown RBP eCLIP4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 KIF1CO43896 1103 aaKnown RBP4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 DAB1O75553 588 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 TMCC1O94876 653 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 ZWINTO95229 277 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 SIX3O95343 332 aaPredicted RBP4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 TRUB2O95900 331 aaKnown RBP4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 NUDT17P0C025 328 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 ZNF286BP0CG31 522 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 STAG3L1P0CL83 205 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 DESP17661 470 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 ACHEP22303 614 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 RDXP35241 583 aaKnown RBP4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 RPL21P46778 160 aaKnown RBP4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 RGS19P49795 217 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 SELENOPP49908 381 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 GPR143P51810 404 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 PLTPP55058 493 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 CDH13P55290 713 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 GSCP56915 257 aaPredicted RBP4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 GRSF1Q12849 480 aaKnown RBP eCLIP4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 PPIGQ13427 754 aaKnown RBP eCLIP4.1□□□□□ -1.752e-7■□□□□ 8.5
CAPNS1-210ENST00000590211 NAE1Q13564 534 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 PIGHQ14442 188 aaPredicted RBP4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 GRB14Q14449 540 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 TMEM132DQ14C87 1099 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 SIX1Q15475 284 aaPredicted RBP4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 CDSNQ15517 529 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 HADHQ16836 314 aaKnown RBP4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 C2orf76Q3KRA6 126 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 GLRA4Q5JXX5 417 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 PRAMEF19Q5SWL8 479 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 LRRC38Q5VT99 294 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 KCTD16Q68DU8 428 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 RAB12Q6IQ22 244 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 CES5AQ6NT32 575 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 ZNF585AQ6P3V2 769 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 LRRC31Q6UY01 552 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 SLC29A4Q7RTT9 530 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 PHLDB2Q86SQ0 1253 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 ERICH1Q86X53 443 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 FAM217AQ8IXS0 508 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 SLC44A3Q8N4M1 653 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 ZBTB2Q8N680 514 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 NIPA2Q8N8Q9 360 aa4.1□□□□□ -1.75
CAPNS1-210ENST00000590211 FBXO25Q8TCJ0 367 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms