RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 PRMT9Q6P2P2 845 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 TMEM205Q6UW68 189 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 LANCL3Q6ZV70 420 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 ZC3H7AQ8IWR0 971 aaKnown RBP12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 SLC22A15Q8IZD6 547 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 PHF10Q8WUB8 498 aaKnown RBP12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 TBL1YQ9BQ87 522 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 HEMGNQ9BXL5 484 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 CXXC4Q9H2H0 198 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 DLL4Q9NR61 685 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 INTS7Q9NVH2 962 aaKnown RBP12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 ZNHIT6Q9NWK9 470 aaKnown RBP12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 DDX56Q9NY93 547 aaKnown RBP12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 RUVBL2Q9Y230 463 aaKnown RBP12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 FAM90A27PA6NNH2 459 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 AKR1B15C9JRZ8 316 aaPredicted RBP12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 E9PLN8 166 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 RASGRF2O14827 1237 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 TTI1O43156 1089 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 SRPX2O60687 465 aaPredicted RBP12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 FTH1P02794 183 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 FOXN2P32314 431 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 HSPA14Q0VDF9 509 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 TBX2Q13207 712 aaPredicted RBP12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 DSG2Q14126 1118 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 POU6F1Q14863 301 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 OR1C1Q15619 314 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 SLC18A3Q16572 532 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 PRTGQ2VWP7 1150 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 KRTCAP3Q53RY4 240 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 ODF2Q5BJF6 829 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 ACER2Q5QJU3 275 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 ANKRD20A2Q5SQ80 823 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 ANKRD20A1Q5TYW2 823 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 ANKRD20A3Q5VUR7 823 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 FBXO42Q6P3S6 717 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 CEP128Q6ZU80 1094 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 Q71RC1 249 aaPredicted RBP12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 RNF44Q7L0R7 432 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 GALNTL5Q7Z4T8 443 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 TMTC1Q8IUR5 882 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 RPRMLQ8N4K4 120 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 OR2L3Q8NG85 312 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 SCMH1Q96GD3 660 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 CABS1Q96KC9 395 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 SMR3AQ99954 134 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 VKORC1Q9BQB6 163 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 LCMT1Q9UIC8 334 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 RUVBL1Q9Y265 456 aaKnown RBP12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 NFS1Q9Y697 457 aa12.09□□□□□ -0.47
PRKCSH-210ENST00000589990 A0A1W2PPV9 198 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 CCDC162PA2VCL2 907 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 RCCD1A6NED2 376 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 TMEM200CA6NKL6 621 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 HACD1B0YJ81 288 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 TARM1B6A8C7 271 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 H0YGG7 62 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 H7C0C1 242 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 FOXS1O43638 330 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 TOXO94900 526 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 ZRANB2O95218 330 aaKnown RBP eCLIP12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 PTGER1P34995 402 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 SLC26A3P40879 764 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 BDKRB1P46663 353 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 ATP5OP48047 213 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 NR0B1P51843 470 aaKnown RBP12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 ARF3P61204 181 aaPredicted RBP12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 CEBPEQ15744 281 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 MUM1Q2TAK8 710 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 DNAJC21Q5F1R6 531 aaKnown RBP12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 ZNF468Q5VIY5 522 aaPredicted RBP12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 PACS1Q6VY07 963 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 CRLF3Q8IUI8 442 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 CNGA4Q8IV77 575 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 DCUN1D3Q8IWE4 304 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 DMRTC2Q8IXT2 367 aaPredicted RBP12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 ARHGEF39Q8N4T4 335 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 SPC24Q8NBT2 197 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 OR2A1Q8NGT9 310 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 ZUFSPQ96AP4 578 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 SLC22A18Q96BI1 424 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 MMABQ96EY8 250 aaPredicted RBP12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 GRPEL1Q9HAV7 217 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 ARNT2Q9HBZ2 717 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 SPTLC3Q9NUV7 552 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 MKL2Q9ULH7 1088 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 RPH3AQ9Y2J0 694 aaPredicted RBP12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 R3HDM2Q9Y2K5 976 aaKnown RBP12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 FAM169AQ9Y6X4 670 aa12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 FN1P02751 2386 aaKnown RBP12.08□□□□□ -0.48
PRKCSH-210ENST00000589990 A0A0A6YYC8 382 aaPredicted RBP12.07□□□□□ -0.48
PRKCSH-210ENST00000589990 FAM221AA4D161 298 aa12.07□□□□□ -0.48
PRKCSH-210ENST00000589990 I3L1I5 382 aaPredicted RBP12.07□□□□□ -0.48
PRKCSH-210ENST00000589990 SPOPO43791 374 aa12.07□□□□□ -0.48
PRKCSH-210ENST00000589990 MFAP3LO75121 409 aa12.07□□□□□ -0.48
PRKCSH-210ENST00000589990 GPC4O75487 556 aa12.07□□□□□ -0.48
PRKCSH-210ENST00000589990 FAM155BO75949 473 aa12.07□□□□□ -0.48
PRKCSH-210ENST00000589990 NEURL1O76050 574 aa12.07□□□□□ -0.48
PRKCSH-210ENST00000589990 STATHP02808 62 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms