RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 PAIP2Q9BPZ3 127 aaKnown RBP13.11□□□□□ -0.31
VMP1-210ENST00000589823 DPH7Q9BTV6 452 aa13.11□□□□□ -0.31
VMP1-210ENST00000589823 ERVK-6Q9BXR3 956 aa13.11□□□□□ -0.31
VMP1-210ENST00000589823 KLHL25Q9H0H3 589 aa13.11□□□□□ -0.31
VMP1-210ENST00000589823 ZNF768Q9H5H4 540 aaKnown RBP13.11□□□□□ -0.31
VMP1-210ENST00000589823 PDE7BQ9NP56 450 aa13.11□□□□□ -0.31
VMP1-210ENST00000589823 OXSMQ9NWU1 459 aa13.11□□□□□ -0.31
VMP1-210ENST00000589823 SEMA5BQ9P283 1151 aa13.11□□□□□ -0.31
VMP1-210ENST00000589823 SNX7Q9UNH6 387 aa13.11□□□□□ -0.31
VMP1-210ENST00000589823 ASB1Q9Y576 335 aa13.11□□□□□ -0.31
VMP1-210ENST00000589823 E2F3O00716 465 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 HGSO14964 777 aaPredicted RBP13.1□□□□□ -0.31
VMP1-210ENST00000589823 TRIM13O60858 407 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 SUPT7LO94864 414 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 BPGMP07738 259 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 RPS17P08708 135 aaKnown RBP13.1□□□□□ -0.31
VMP1-210ENST00000589823 NEFHP12036 1026 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 ALDH3A1P30838 453 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 SERPINB4P48594 390 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 CCR8P51685 355 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 PDX1P52945 283 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 NAGLUP54802 743 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 NAA20P61599 178 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 HSD11B2P80365 405 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 GTF2H2Q13888 395 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 MPP2Q14168 576 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 TMTC4Q5T4D3 741 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 GTF2H2CQ6P1K8 395 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 GOLGA7Q7Z5G4 137 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 TMPRSS11BQ86T26 416 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 NUDCD3Q8IVD9 361 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 CACTIN-AS1Q8N1I8 211 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 CCNYL1Q8N7R7 359 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 DCBLD1Q8N8Z6 715 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 AGBL5Q8NDL9 886 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 PPP1R14CQ8TAE6 165 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 MGARPQ8TDB4 240 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 NEIL2Q969S2 332 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 ATP6V1E2Q96A05 226 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 L3HYPDHQ96EM0 354 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 TCTN2Q96GX1 697 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 SLC41A2Q96JW4 573 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 TMEM237Q96Q45 408 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 MECRQ9BV79 373 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 C1QTNF3Q9BXJ4 246 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 PELI2Q9HAT8 420 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 SLC6A20Q9NP91 592 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 TMEM184CQ9NVA4 438 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 CUEDC1Q9NWM3 386 aaPredicted RBP13.1□□□□□ -0.31
VMP1-210ENST00000589823 PCTPQ9UKL6 214 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 KLHL20Q9Y2M5 609 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 KLK4Q9Y5K2 254 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 UNC13CQ8NB66 2214 aa13.1□□□□□ -0.31
VMP1-210ENST00000589823 E7EQ34 232 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 H7BY64 318 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 BIRC5O15392 142 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 H2AFYO75367 372 aaKnown RBP13.09□□□□□ -0.31
VMP1-210ENST00000589823 C1GALT1C1LP0DN25 315 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 NELFEP18615 380 aaKnown RBP13.09□□□□□ -0.31
VMP1-210ENST00000589823 GRK3P35626 688 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 ARL1P40616 181 aaPredicted RBP13.09□□□□□ -0.31
VMP1-210ENST00000589823 CCNG1P51959 295 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 PPP2R2AP63151 447 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 YBX1P67809 324 aaKnown RBP13.09□□□□□ -0.31
VMP1-210ENST00000589823 IRF8Q02556 426 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 RBBP7Q16576 425 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 UNC50Q53HI1 259 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 ZC3H12BQ5HYM0 836 aaKnown RBP13.09□□□□□ -0.31
VMP1-210ENST00000589823 FCRL6Q6DN72 434 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 NXPE4Q6UWF7 544 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 CHCHD4Q8N4Q1 142 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 TBC1D19Q8N5T2 526 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 ABHD11Q8NFV4 315 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 ZNF483Q8TF39 744 aaPredicted RBP13.09□□□□□ -0.31
VMP1-210ENST00000589823 N4BP2L2Q92802 583 aaPredicted RBP13.09□□□□□ -0.31
VMP1-210ENST00000589823 LIN37Q96GY3 246 aaPredicted RBP13.09□□□□□ -0.31
VMP1-210ENST00000589823 PRAP1Q96NZ9 151 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 CMKLR1Q99788 373 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 PLCD4Q9BRC7 762 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 IPPKQ9H8X2 491 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 MLXIPLQ9NP71 852 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 SH2B3Q9UQQ2 575 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 BTRCQ9Y297 605 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 STK38LQ9Y2H1 464 aa13.09□□□□□ -0.31
VMP1-210ENST00000589823 CFAP54Q96N23 3096 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 IGKV1-8A0A0C4DH67 115 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 WDR91A4D1P6 747 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 OR2A25A4D2G3 310 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 AGRPO00253 132 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 MLYCDO95822 493 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 DHRS4L1P0CG22 281 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 NR1D1P20393 614 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 CXCR2P25025 360 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 CDH13P55290 713 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 CSNK1G2P78368 415 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 ACY1Q03154 408 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 CLCQ05315 142 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 TARDBPQ13148 414 aaKnown RBP eCLIP13.08□□□□□ -0.32
VMP1-210ENST00000589823 CHIT1Q13231 466 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 C16orf72Q14CZ0 275 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms