RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 ZNF624Q9P2J8 865 aaPredicted RBP11.01□□□□□ -0.65
SMAD4-205ENST00000588745 APOBEC3BQ9UH17 382 aaKnown RBP11.01□□□□□ -0.65
SMAD4-205ENST00000588745 EIF3LQ9Y262 564 aaKnown RBP11.01□□□□□ -0.65
SMAD4-205ENST00000588745 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 TLR4O00206 839 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 NR5A2O00482 541 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 GSC2O15499 205 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 SEC22BO75396 215 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 CELA2BP08218 269 aaPredicted RBP11□□□□□ -0.65
SMAD4-205ENST00000588745 SNRPB2P08579 225 aaKnown RBP11□□□□□ -0.65
SMAD4-205ENST00000588745 PCNAP12004 261 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 CTSEP14091 401 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 ITGAXP20702 1163 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 MAOBP27338 520 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 PSMB5P28074 263 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 SHMT2P34897 504 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 SLC19A1P41440 591 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 NUDT2P50583 147 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 SLC25A3Q00325 362 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 STX5Q13190 355 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 DDX39BQ13838 428 aaKnown RBP11□□□□□ -0.65
SMAD4-205ENST00000588745 HIST2H2ACQ16777 129 aaPredicted RBP11□□□□□ -0.65
SMAD4-205ENST00000588745 IL23RQ5VWK5 629 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 ICE2Q659A1 982 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 REP15Q6BDI9 236 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 HIST2H2AA3Q6FI13 130 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 ADNP2Q6IQ32 1131 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 TSSK4Q6SA08 328 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 CYP20A1Q6UW02 462 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 LONP2Q86WA8 852 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 FAM129CQ86XR2 697 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 FUNDC1Q8IVP5 155 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 PARP9Q8IXQ6 854 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 TMEFF1Q8IYR6 380 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 ARHGAP24Q8N264 748 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 EDAQ92838 391 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 UBE2E3Q969T4 207 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 MCUR1Q96AQ8 359 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 CMTM7Q96FZ5 175 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 LRRC61Q9BV99 259 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 MIR1-1HGQ9H1L0 117 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 DUSP15Q9H1R2 295 aaPredicted RBP11□□□□□ -0.65
SMAD4-205ENST00000588745 SPNS1Q9H2V7 528 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 CAAP1Q9H8G2 361 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 POT1Q9NUX5 634 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 CUEDC1Q9NWM3 386 aaPredicted RBP11□□□□□ -0.65
SMAD4-205ENST00000588745 TMED5Q9Y3A6 229 aa11□□□□□ -0.65
SMAD4-205ENST00000588745 BBIP1A8MTZ0 92 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 AIM2O14862 343 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 CSF2P04141 144 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 G6PDP11413 515 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 TDGF1P13385 188 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 ACPPP15309 386 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 NME1P15531 152 aaKnown RBP10.99□□□□□ -0.65
SMAD4-205ENST00000588745 JUNDP17535 347 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 JAK1P23458 1154 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 MAPK1P28482 360 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 FNTBP49356 437 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 CCR8P51685 355 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 NXPH1P58417 271 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 PHEXP78562 749 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 REEP5Q00765 189 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 MEF2AQ02078 507 aaPredicted RBP10.99□□□□□ -0.65
SMAD4-205ENST00000588745 RCAN2Q14206 197 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 KIAA0040Q15053 153 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 WDR45BQ5MNZ6 344 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 CACHD1Q5VU97 1274 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 IYDQ6PHW0 289 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 C16orf89Q6UX73 402 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 ARMCX6Q7L4S7 300 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 TAF8Q7Z7C8 310 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 TRIM48Q8IWZ4 208 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 KRT78Q8N1N4 520 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 RNF175Q8N4F7 328 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 KYQ8NBH2 561 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 ABHD11Q8NFV4 315 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 OR2A1Q8NGT9 310 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 HUS1BQ8NHY5 278 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 C1orf216Q8TAB5 229 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 LCN9Q8WX39 176 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 DNASE2BQ8WZ79 361 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 SLC45A3Q96JT2 553 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 FCRL1Q96LA6 429 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 MTERF1Q99551 399 aaKnown RBP10.99□□□□□ -0.65
SMAD4-205ENST00000588745 NPAS2Q99743 824 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 MMADHCQ9H3L0 296 aaPredicted RBP10.99□□□□□ -0.65
SMAD4-205ENST00000588745 SLC40A1Q9NP59 571 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 NDE1Q9NXR1 346 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 OR6C2Q9NZP2 312 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 VPS29Q9UBQ0 182 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 TSC22D4Q9Y3Q8 395 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 PCDHB11Q9Y5F2 797 aa10.99□□□□□ -0.65
SMAD4-205ENST00000588745 TP53BP1Q12888 1972 aaPredicted RBP10.98□□□□□ -0.65
SMAD4-205ENST00000588745 COL6A3P12111 3177 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 KIR2DS5A0A0G2JLQ3 304 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 A0A0G2JNG1 304 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 OR5K4A6NMS3 321 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 MAGEB17A8MXT2 336 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 KIR2DS3K7RE56 304 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 FBP2O00757 339 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms