RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 SP140Q13342 867 aa18.69■□□□□ 0.58
TPM4-208ENST00000588410 MUM1Q2TAK8 710 aa18.69■□□□□ 0.58
TPM4-208ENST00000588410 HECTD2Q5U5R9 776 aa18.69■□□□□ 0.58
TPM4-208ENST00000588410 STEAP4Q687X5 459 aa18.69■□□□□ 0.58
TPM4-208ENST00000588410 TRMT10BQ6PF06 316 aaKnown RBP18.69■□□□□ 0.58
TPM4-208ENST00000588410 MAATS1Q7Z4T9 603 aa18.69■□□□□ 0.58
TPM4-208ENST00000588410 PAQR7Q86WK9 346 aa18.69■□□□□ 0.58
TPM4-208ENST00000588410 CLEC1AQ8NC01 280 aa18.69■□□□□ 0.58
TPM4-208ENST00000588410 FBXO36Q8NEA4 188 aa18.69■□□□□ 0.58
TPM4-208ENST00000588410 RERGQ96A58 199 aaPredicted RBP18.69■□□□□ 0.58
TPM4-208ENST00000588410 COL26A1Q96A83 441 aa18.69■□□□□ 0.58
TPM4-208ENST00000588410 CABS1Q96KC9 395 aa18.69■□□□□ 0.58
TPM4-208ENST00000588410 HIST1H2AHQ96KK5 128 aa18.69■□□□□ 0.58
TPM4-208ENST00000588410 HIST1H2AJQ99878 128 aa18.69■□□□□ 0.58
TPM4-208ENST00000588410 H2AFJQ9BTM1 129 aa18.69■□□□□ 0.58
TPM4-208ENST00000588410 CLMPQ9H6B4 373 aa18.69■□□□□ 0.58
TPM4-208ENST00000588410 PLAC1Q9HBJ0 212 aa18.69■□□□□ 0.58
TPM4-208ENST00000588410 CCDC177Q9NQR7 707 aaPredicted RBP18.69■□□□□ 0.58
TPM4-208ENST00000588410 ZFATQ9P243 1243 aa18.69■□□□□ 0.58
TPM4-208ENST00000588410 NXT1Q9UKK6 140 aaKnown RBP18.69■□□□□ 0.58
TPM4-208ENST00000588410 ZNF451Q9Y4E5 1061 aa18.69■□□□□ 0.58
TPM4-208ENST00000588410 MAU2Q9Y6X3 613 aa18.69■□□□□ 0.58
TPM4-208ENST00000588410 FAM187AA6NFU0 413 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 H0YGG7 62 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 FANCGO15287 622 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 ONECUT2O95948 504 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 PDGFAP04085 211 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 EZRP15311 586 aaKnown RBP18.68■□□□□ 0.58
TPM4-208ENST00000588410 ITGAXP20702 1163 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 IMPA1P29218 277 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 OR1D4P47884 311 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 ARF3P61204 181 aaPredicted RBP18.68■□□□□ 0.58
TPM4-208ENST00000588410 MRPS25P82663 173 aaKnown RBP18.68■□□□□ 0.58
TPM4-208ENST00000588410 TIAL1Q01085 375 aaKnown RBP eCLIP18.68■□□□□ 0.58
TPM4-208ENST00000588410 MGAT5Q09328 741 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 FRG1Q14331 258 aaKnown RBP18.68■□□□□ 0.58
TPM4-208ENST00000588410 COLEC12Q5KU26 742 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 FAM45BPQ6NSW5 357 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 PRMT9Q6P2P2 845 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 CSNK1A1LQ8N752 337 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 SPATA4Q8NEY3 305 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 FAM45AQ8TCE6 357 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.68■□□□□ 0.58
TPM4-208ENST00000588410 WDR83Q9BRX9 315 aaKnown RBP18.68■□□□□ 0.58
TPM4-208ENST00000588410 PCBD2Q9H0N5 130 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 WDR54Q9H977 334 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 PARVBQ9HBI1 364 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 ZNF304Q9HCX3 659 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 P4HTMQ9NXG6 502 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 STOX2Q9P2F5 926 aaPredicted RBP18.68■□□□□ 0.58
TPM4-208ENST00000588410 ADAMTS6Q9UKP5 1117 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 PDE10AQ9Y233 779 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 VWA7Q9Y334 891 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 PCDHGB7Q9Y5F8 929 aa18.68■□□□□ 0.58
TPM4-208ENST00000588410 SPTA1P02549 2419 aa18.67■□□□□ 0.58
TPM4-208ENST00000588410 IGKV1-8A0A0C4DH67 115 aa18.67■□□□□ 0.58
TPM4-208ENST00000588410 TXNDC9O14530 226 aa18.67■□□□□ 0.58
TPM4-208ENST00000588410 CEACAM4O75871 244 aa18.67■□□□□ 0.58
TPM4-208ENST00000588410 UMODP07911 640 aa18.67■□□□□ 0.58
TPM4-208ENST00000588410 HRH2P25021 359 aa18.67■□□□□ 0.58
TPM4-208ENST00000588410 FOXL2P58012 376 aa18.67■□□□□ 0.58
TPM4-208ENST00000588410 NKG7Q16617 165 aa18.67■□□□□ 0.58
TPM4-208ENST00000588410 ZNF425Q6IV72 752 aa18.67■□□□□ 0.58
TPM4-208ENST00000588410 COX15Q7KZN9 410 aa18.67■□□□□ 0.58
TPM4-208ENST00000588410 LRRC56Q8IYG6 542 aaPredicted RBP18.67■□□□□ 0.58
TPM4-208ENST00000588410 ZBED8Q8IZ13 594 aa18.67■□□□□ 0.58
TPM4-208ENST00000588410 C17orf53Q8N3J3 647 aaPredicted RBP18.67■□□□□ 0.58
TPM4-208ENST00000588410 FDCSPQ8NFU4 85 aa18.67■□□□□ 0.58
TPM4-208ENST00000588410 ALKBH8Q96BT7 664 aaKnown RBP18.67■□□□□ 0.58
TPM4-208ENST00000588410 ERP44Q9BS26 406 aa18.67■□□□□ 0.58
TPM4-208ENST00000588410 TRIM54Q9BYV2 358 aa18.67■□□□□ 0.58
TPM4-208ENST00000588410 SLC26A1Q9H2B4 701 aa18.67■□□□□ 0.58
TPM4-208ENST00000588410 DPH5Q9H2P9 285 aa18.67■□□□□ 0.58
TPM4-208ENST00000588410 GPR83Q9NYM4 423 aa18.67■□□□□ 0.58
TPM4-208ENST00000588410 CDC23Q9UJX2 597 aa18.67■□□□□ 0.58
TPM4-208ENST00000588410 CDC14AQ9UNH5 594 aa18.67■□□□□ 0.58
TPM4-208ENST00000588410 H7BY64 318 aa18.66■□□□□ 0.58
TPM4-208ENST00000588410 FBLP22087 321 aaKnown RBP18.66■□□□□ 0.58
TPM4-208ENST00000588410 FDXRP22570 491 aa18.66■□□□□ 0.58
TPM4-208ENST00000588410 EMP3P54852 163 aa18.66■□□□□ 0.58
TPM4-208ENST00000588410 TBPL1P62380 186 aa18.66■□□□□ 0.58
TPM4-208ENST00000588410 ETF1P62495 437 aaKnown RBP18.66■□□□□ 0.58
TPM4-208ENST00000588410 RELAQ04206 551 aa18.66■□□□□ 0.58
TPM4-208ENST00000588410 OCA2Q04671 838 aa18.66■□□□□ 0.58
TPM4-208ENST00000588410 PRTGQ2VWP7 1150 aa18.66■□□□□ 0.58
TPM4-208ENST00000588410 DCAF10Q5QP82 559 aa18.66■□□□□ 0.58
TPM4-208ENST00000588410 PRAMEF13Q5VWM6 474 aa18.66■□□□□ 0.58
TPM4-208ENST00000588410 AGTRAPQ6RW13 159 aa18.66■□□□□ 0.58
TPM4-208ENST00000588410 SYT10Q6XYQ8 523 aa18.66■□□□□ 0.58
TPM4-208ENST00000588410 PPP1R32Q7Z5V6 425 aa18.66■□□□□ 0.58
TPM4-208ENST00000588410 NACC2Q96BF6 587 aa18.66■□□□□ 0.58
TPM4-208ENST00000588410 PRAP1Q96NZ9 151 aa18.66■□□□□ 0.58
TPM4-208ENST00000588410 SOX17Q9H6I2 414 aaPredicted RBP18.66■□□□□ 0.58
TPM4-208ENST00000588410 MLXIPLQ9NP71 852 aa18.66■□□□□ 0.58
TPM4-208ENST00000588410 CUEDC1Q9NWM3 386 aaPredicted RBP18.66■□□□□ 0.58
TPM4-208ENST00000588410 CTSFQ9UBX1 484 aa18.66■□□□□ 0.58
TPM4-208ENST00000588410 GCN1Q92616 2671 aaKnown RBP18.65■□□□□ 0.58
TPM4-208ENST00000588410 E7ESA3 106 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 HAT1O14929 419 aa18.65■□□□□ 0.58
TPM4-208ENST00000588410 PRPF4O43172 522 aaKnown RBP eCLIP18.65■□□□□ 0.582e-10■■□□□ 13.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms