RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 L3MBTL4Q8NA19 623 aa16.37■□□□□ 0.21
PRKCSH-205ENST00000587327 TTC29Q8NA56 475 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-205ENST00000587327 ITPKCQ96DU7 683 aa16.37■□□□□ 0.21
PRKCSH-205ENST00000587327 ZNF300Q96RE9 604 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-205ENST00000587327 SLC12A9Q9BXP2 914 aa16.37■□□□□ 0.21
PRKCSH-205ENST00000587327 SCN8AQ9UQD0 1980 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 hCG_2039718K7EN88 272 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 CLIC1O00299 241 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 GFRA2O00451 464 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 LATS1O95835 1130 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 FABP3P05413 133 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 ACPPP15309 386 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 AMD1P17707 334 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 HOXA9P31269 272 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 MAPK8P45983 427 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 SERPINB10P48595 397 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 MASP1P48740 699 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 ST13P50502 369 aaKnown RBP16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 VLDLRP98155 873 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 DUOXA1Q1HG43 343 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 NOXRED1Q6NXP6 359 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 ZSWIM9Q86XI8 627 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 SLC39A11Q8N1S5 342 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 TCAIMQ8N3R3 496 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 ZNF540Q8NDQ6 660 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 APOLD1Q96LR9 279 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 ATP13A3Q9H7F0 1226 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 ZDHHC3Q9NYG2 299 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 PDP1Q9P0J1 537 aaPredicted RBP16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 RPS6KA6Q9UK32 745 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 PMF1-BGLAPU3KQ54 211 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 ZNF106Q9H2Y7 1883 aaKnown RBP16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 TMEM247A6NEH6 219 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 NPIPB15A6NHN6 443 aaPredicted RBP16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 GREM1O60565 184 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 DIRAS1O95057 198 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 ENGP17813 658 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 GPX2P18283 190 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 PRPS1L1P21108 318 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 ALDH4A1P30038 563 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 KDELR2P33947 212 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 SLC6A12P48065 614 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 CSNK1DP48730 415 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 MNX1P50219 401 aaPredicted RBP16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 PTPN5P54829 565 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 B4GALNT1Q00973 533 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 IFITM3Q01628 133 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 DGCR6Q14129 220 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 MAD2L1BPQ15013 274 aaPredicted RBP16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 SMN1Q16637 294 aaKnown RBP16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 PERM1Q5SV97 790 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 NEK5Q6P3R8 708 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 CCDC81Q6ZN84 652 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 VTCN1Q7Z7D3 282 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 ZZZ3Q8IYH5 903 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 MFSD4AQ8N468 514 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 DYNC2LI1Q8TCX1 351 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 NELL1Q92832 810 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 PANX1Q96RD7 426 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 COPS8Q99627 209 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 RHNO1Q9BSD3 238 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 ACOT13Q9NPJ3 140 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 INIPQ9NRY2 104 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 ATAD3AQ9NVI7 634 aa16.36■□□□□ 0.21
PRKCSH-205ENST00000587327 EIF3FO00303 357 aaPredicted RBP16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 FPGTO14772 594 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 RGS10O43665 173 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 MRPS14O60783 128 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 MT-ND2P03891 347 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 HIST1H2AGP0C0S8 130 aaPredicted RBP16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 HIST1H2ADP20671 130 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 AOAHP28039 575 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 PSMB9P28065 219 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 EPHA2P29317 976 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 HNMTP50135 292 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 MVKQ03426 396 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 ABRQ12979 859 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 PTCHD3Q3KNS1 767 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 PAGE2BQ5JRK9 111 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 SPOUT1Q5T280 376 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 KIAA1614Q5VZ46 1190 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 FRG2Q64ET8 278 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 CNKSR3Q6P9H4 555 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 CRTC1Q6UUV9 634 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 GALNT10Q86SR1 603 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 HORMAD1Q86X24 394 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 SVOPQ8N4V2 548 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 CSGALNACT1Q8TDX6 532 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 ASB11Q8WXH4 323 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 PYCR2Q96C36 320 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 HIST1H2AHQ96KK5 128 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 FRG2BQ96QU4 278 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 SLC22A12Q96S37 553 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 LYSMD1Q96S90 227 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 HIST1H2AJQ99878 128 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 H2AFJQ9BTM1 129 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 HERC2P3Q9BVR0 1158 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 ASPSCR1Q9BZE9 553 aa16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 REXO4Q9GZR2 422 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-205ENST00000587327 RNF208Q9H0X6 261 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms