RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 AIG1Q9NVV5 245 aa9.84□□□□□ -0.83
APOC1-201ENST00000586638 TAS2R1Q9NYW7 299 aa9.84□□□□□ -0.83
APOC1-201ENST00000586638 SCHIP1Q9P0W5 487 aaPredicted RBP9.84□□□□□ -0.83
APOC1-201ENST00000586638 SPATA7Q9P0W8 599 aa9.84□□□□□ -0.83
APOC1-201ENST00000586638 ACSL5Q9ULC5 683 aa9.84□□□□□ -0.83
APOC1-201ENST00000586638 ZNF490Q9ULM2 529 aaPredicted RBP9.84□□□□□ -0.83
APOC1-201ENST00000586638 DYRK1BQ9Y463 629 aa9.84□□□□□ -0.83
APOC1-201ENST00000586638 SPEGQ15772 3267 aa9.84□□□□□ -0.83
APOC1-201ENST00000586638 FRYQ5TBA9 3013 aa9.84□□□□□ -0.83
APOC1-201ENST00000586638 SNRNP200O75643 2136 aaKnown RBP9.83□□□□□ -0.84
APOC1-201ENST00000586638 TDRD6O60522 2096 aaKnown RBP9.83□□□□□ -0.84
APOC1-201ENST00000586638 PRAMEF33A0A0G2JMD5 474 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 OR52A4PA6NMU1 304 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 E7ENX8 843 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 PRAMEF26H0Y7S4 382 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 PSMD12O00232 456 aaPredicted RBP9.83□□□□□ -0.84
APOC1-201ENST00000586638 SLC28A1O00337 649 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 NR5A2O00482 541 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 LSM1O15116 133 aaKnown RBP9.83□□□□□ -0.84
APOC1-201ENST00000586638 RGS14O43566 566 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 EML2O95834 649 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 KRT6AP02538 564 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 KRT6BP04259 564 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 ERGP11308 486 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 EZRP15311 586 aaKnown RBP9.83□□□□□ -0.84
APOC1-201ENST00000586638 BCKDHBP21953 392 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 IDSP22304 550 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 GPX3P22352 226 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 PSMB5P28074 263 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 ADSLP30566 484 aaPredicted RBP9.83□□□□□ -0.84
APOC1-201ENST00000586638 KRT6CP48668 564 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 NUDT2P50583 147 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 NEK2P51955 445 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 DIO3P55073 304 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 SRP54P61011 504 aaKnown RBP9.83□□□□□ -0.84
APOC1-201ENST00000586638 ELF3P78545 371 aaPredicted RBP9.83□□□□□ -0.84
APOC1-201ENST00000586638 CTBSQ01459 385 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 TAP2Q03519 686 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 DDX39BQ13838 428 aaKnown RBP9.83□□□□□ -0.84
APOC1-201ENST00000586638 CYLC2Q14093 348 aaPredicted RBP9.83□□□□□ -0.84
APOC1-201ENST00000586638 SLBPQ14493 270 aaKnown RBP eCLIP9.83□□□□□ -0.84
APOC1-201ENST00000586638 CLCA4Q14CN2 919 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 C6orf136Q5SQH8 315 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 THEMIS2Q5TEJ8 643 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 REP15Q6BDI9 236 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 LAYNQ6UX15 382 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 RNF165Q6ZSG1 346 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 SPATA19Q7Z5L4 167 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 HID1Q8IV36 788 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 C10orf67Q8IYJ2 551 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 TBC1D21Q8IYX1 336 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 RGL4Q8IZJ4 473 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 MIER2Q8N344 545 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 CHCHD4Q8N4Q1 142 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 MAGEC3Q8TD91 643 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 SELENOMQ8WWX9 145 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 JPH3Q8WXH2 748 aaPredicted RBP9.83□□□□□ -0.84
APOC1-201ENST00000586638 NEIL2Q969S2 332 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 CAMK1GQ96NX5 476 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 NPAS2Q99743 824 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 ORAI3Q9BRQ5 295 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 TMEM121BQ9BXQ6 578 aaPredicted RBP9.83□□□□□ -0.84
APOC1-201ENST00000586638 ACPTQ9BZG2 426 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 SPNS1Q9H2V7 528 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 TCEAL2Q9H3H9 227 aaPredicted RBP9.83□□□□□ -0.84
APOC1-201ENST00000586638 ELOVL6Q9H5J4 265 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 XKR8Q9H6D3 395 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 PFDN4Q9NQP4 134 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 CCDC167Q9P0B6 97 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 SNX6Q9UNH7 406 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 DMTF1Q9Y222 760 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 CCL27Q9Y4X3 112 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 HS3ST3A1Q9Y663 406 aa9.83□□□□□ -0.84
APOC1-201ENST00000586638 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 A0A1W2PPC4 97 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 AIM2O14862 343 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 UGDHO60701 494 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 KCNJ13O60928 360 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 NDUFS2O75306 463 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 ULK1O75385 1050 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 THEGLP0DJG4 465 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 THRAP10827 490 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 MTHFD1P11586 935 aaKnown RBP9.82□□□□□ -0.84
APOC1-201ENST00000586638 PCNAP12004 261 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 CDH1P12830 882 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 HOXB3P14651 431 aaPredicted RBP9.82□□□□□ -0.84
APOC1-201ENST00000586638 IDO1P14902 403 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 PKLRP30613 574 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 CPOXP36551 454 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 ACTR1BP42025 376 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 RABIFP47224 123 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 ACTR1AP61163 376 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 YPEL5P62699 121 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 MAPRE2Q15555 327 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 RPE65Q16518 533 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 AP5B1Q2VPB7 878 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 DNAL1Q4LDG9 190 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 ZNF542PQ5EBM4 170 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 TRIM61Q5EBN2 209 aa9.82□□□□□ -0.84
APOC1-201ENST00000586638 CATSPEREQ5SY80 951 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms