RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 SYT11Q9BT88 431 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 AP1M1Q9BXS5 423 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 GPR63Q9BZJ6 419 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 FTOQ9C0B1 505 aaKnown RBP eCLIP2.5□□□□□ -2.012e-7■□□□□ 8.3
VAPA-208ENST00000584796 PRKRIP1Q9H875 184 aaPredicted RBP2.5□□□□□ -2.01
VAPA-208ENST00000584796 APOBEC3GQ9HC16 384 aaKnown RBP2.5□□□□□ -2.01
VAPA-208ENST00000584796 ZNF71Q9NQZ8 489 aaPredicted RBP2.5□□□□□ -2.01
VAPA-208ENST00000584796 ATAD3AQ9NVI7 634 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 NSMCE4AQ9NXX6 385 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 NKIRAS2Q9NYR9 191 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 KCND2Q9NZV8 630 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 RAI14Q9P0K7 980 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 ASIC3Q9UHC3 531 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 BARX2Q9UMQ3 279 aaPredicted RBP2.5□□□□□ -2.01
VAPA-208ENST00000584796 PCNX3Q9H6A9 2034 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 ADAMTS9Q9P2N4 1935 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 MYO16Q9Y6X6 1858 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 CACNA1EQ15878 2313 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 ZNF462Q96JM2 2506 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 NBPF19A0A087WUL8 3843 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 MROH7Q68CQ1 1323 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 STK36Q9NRP7 1315 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 PLXNB3Q9ULL4 1909 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 A0A087X0M5 115 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 A0A1B0GX30 115 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 BICDL2A1A5D9 508 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 FSD2A1L4K1 749 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 LRRC53A6NM62 1247 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 MAGEB17A8MXT2 336 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 E9PQ18 207 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 SLCO1B7G3V0H7 640 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 PRKAB2O43741 272 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 SYNCRIPO60506 623 aaKnown RBP2.49□□□□□ -2.01
VAPA-208ENST00000584796 ZBED4O75132 1171 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 EML2O95834 649 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 TFAP2AP05549 437 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 POLBP06746 335 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 LIFP15018 202 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 GNAZP19086 355 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 CNTFP26441 200 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 GGT5P36269 586 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 CPOXP36551 454 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 SLC8A3P57103 927 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 DCAF7P61962 342 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 PPARDQ03181 441 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 SIGLEC14Q08ET2 396 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 CDC37Q16543 378 aaPredicted RBP2.49□□□□□ -2.01
VAPA-208ENST00000584796 PRICKLE4Q2TBC4 344 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 CXorf66Q5JRM2 361 aaPredicted RBP2.49□□□□□ -2.01
VAPA-208ENST00000584796 FFAR4Q5NUL3 377 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 SNRNP48Q6IEG0 339 aaKnown RBP2.49□□□□□ -2.01
VAPA-208ENST00000584796 PACS1Q6VY07 963 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 HEATR4Q86WZ0 1026 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 CCDC13Q8IYE1 715 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 CNPY4Q8N129 248 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 SCML4Q8N228 414 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 TTC30BQ8N4P2 665 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 LSMEM1Q8N8F7 131 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 OR2T6Q8NHC8 308 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 SDR42E1Q8WUS8 393 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 RRNAD1Q96FB5 475 aaKnown RBP2.49□□□□□ -2.01
VAPA-208ENST00000584796 OXNAD1Q96HP4 312 aaPredicted RBP2.49□□□□□ -2.01
VAPA-208ENST00000584796 GMPPAQ96IJ6 420 aaPredicted RBP2.49□□□□□ -2.01
VAPA-208ENST00000584796 RPGRIP1Q96KN7 1286 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 TIGD1Q96MW7 591 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 BARD1Q99728 777 aaKnown RBP2.49□□□□□ -2.01
VAPA-208ENST00000584796 SLX1AQ9BQ83 275 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 CHCHD6Q9BRQ6 235 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 RIOK1Q9BRS2 568 aaKnown RBP2.49□□□□□ -2.01
VAPA-208ENST00000584796 RAVER2Q9HCJ3 691 aaKnown RBP2.49□□□□□ -2.01
VAPA-208ENST00000584796 SH3GLB2Q9NR46 395 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 OLA1Q9NTK5 396 aaKnown RBP2.49□□□□□ -2.01
VAPA-208ENST00000584796 ANKEF1Q9NU02 776 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 IRAK4Q9NWZ3 460 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 KLHL8Q9P2G9 620 aaPredicted RBP2.49□□□□□ -2.01
VAPA-208ENST00000584796 EXOGQ9Y2C4 368 aaKnown RBP2.49□□□□□ -2.01
VAPA-208ENST00000584796 APC2O95996 2303 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 FLNCQ14315 2725 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 ATMQ13315 3056 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 KIAA1549LQ6ZVL6 1849 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 NUP205Q92621 2012 aa2.49□□□□□ -2.01
VAPA-208ENST00000584796 ASCC3Q8N3C0 2202 aaKnown RBP2.49□□□□□ -2.01
VAPA-208ENST00000584796 ANKRD17O75179 2603 aaKnown RBP2.49□□□□□ -2.01
VAPA-208ENST00000584796 CLSPNQ9HAW4 1339 aa2.48□□□□□ -2.01
VAPA-208ENST00000584796 FAM237AA0A1B0GTK4 181 aa2.48□□□□□ -2.01
VAPA-208ENST00000584796 PRR32B1ATL7 298 aa2.48□□□□□ -2.01
VAPA-208ENST00000584796 MPHOSPH10O00566 681 aaKnown RBP2.48□□□□□ -2.01
VAPA-208ENST00000584796 CIAO1O76071 339 aa2.48□□□□□ -2.01
VAPA-208ENST00000584796 MLYCDO95822 493 aa2.48□□□□□ -2.01
VAPA-208ENST00000584796 CXCL10P02778 98 aa2.48□□□□□ -2.01
VAPA-208ENST00000584796 TPOP07202 933 aa2.48□□□□□ -2.01
VAPA-208ENST00000584796 ATP1A3P13637 1013 aa2.48□□□□□ -2.01
VAPA-208ENST00000584796 EEF2P13639 858 aaKnown RBP2.48□□□□□ -2.01
VAPA-208ENST00000584796 GATA2P23769 480 aaPredicted RBP2.48□□□□□ -2.01
VAPA-208ENST00000584796 ABCD1P33897 745 aa2.48□□□□□ -2.01
VAPA-208ENST00000584796 ARL1P40616 181 aaPredicted RBP2.48□□□□□ -2.01
VAPA-208ENST00000584796 WNT5AP41221 380 aa2.48□□□□□ -2.01
VAPA-208ENST00000584796 KRTAP10-8P60410 259 aa2.48□□□□□ -2.01
VAPA-208ENST00000584796 VAMP2P63027 116 aa2.48□□□□□ -2.01
VAPA-208ENST00000584796 RPP30P78346 268 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms