RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 BTBD3Q9Y2F9 522 aa9.96□□□□□ -0.81
RFFL-212ENST00000584655 DYRK1BQ9Y463 629 aa9.96□□□□□ -0.81
RFFL-212ENST00000584655 SLCO1B1Q9Y6L6 691 aa9.96□□□□□ -0.81
RFFL-212ENST00000584655 TRIM38O00635 465 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 IDO1P14902 403 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 AOAHP28039 575 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 MMP12P39900 470 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 MADCAM1Q13477 382 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 TRIM25Q14258 630 aaKnown RBP9.96□□□□□ -0.82
RFFL-212ENST00000584655 ZNF423Q2M1K9 1284 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 FRG2Q64ET8 278 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 TRIM48Q8IWZ4 208 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 ISL2Q96A47 359 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 PDXPQ96GD0 296 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 FBXL20Q96IG2 436 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 FAR2Q96K12 515 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 MAGEB10Q96LZ2 347 aaPredicted RBP9.96□□□□□ -0.82
RFFL-212ENST00000584655 FRG2BQ96QU4 278 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 SH3GL3Q99963 347 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 GPR174Q9BXC1 333 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 FOXQ1Q9C009 403 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 LIN28AQ9H9Z2 209 aaKnown RBP9.96□□□□□ -0.82
RFFL-212ENST00000584655 SMURF2Q9HAU4 748 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 GID8Q9NWU2 228 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 STK39Q9UEW8 545 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 CLCA2Q9UQC9 943 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 DHRS12A0PJE2 317 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 ARPC2O15144 300 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 PGRP06401 933 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 CD22P20273 847 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 COL9A1P20849 921 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 SLC6A2P23975 617 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 POLR2IP36954 125 aaKnown RBP9.96□□□□□ -0.82
RFFL-212ENST00000584655 ACVR1Q04771 509 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 C2orf80Q0P641 193 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 MAPRE2Q15555 327 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 GPR33Q49SQ1 333 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 SULT1C3Q6IMI6 304 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 MICU2Q8IYU8 434 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 AMER2Q8N7J2 671 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 TADA1Q96BN2 335 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 OTULINQ96BN8 352 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 NSMCE2Q96MF7 247 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 CCM2Q9BSQ5 444 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 TCEAL2Q9H3H9 227 aaPredicted RBP9.96□□□□□ -0.82
RFFL-212ENST00000584655 RHBDL2Q9NX52 303 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 GULP1Q9UBP9 304 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 ADGRE2Q9UHX3 823 aa9.96□□□□□ -0.82
RFFL-212ENST00000584655 TNPO3Q9Y5L0 923 aaKnown RBP9.96□□□□□ -0.82
RFFL-212ENST00000584655 TCF20Q9UGU0 1960 aaKnown RBP9.95□□□□□ -0.82
RFFL-212ENST00000584655 ANKDD1BA6NHY2 528 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 GPC1P35052 558 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 DNAJB13P59910 316 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 RPS14P62263 151 aaKnown RBP9.95□□□□□ -0.82
RFFL-212ENST00000584655 CDKL1Q00532 357 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 SIM2Q14190 667 aaPredicted RBP9.95□□□□□ -0.82
RFFL-212ENST00000584655 SNRNP27Q8WVK2 155 aaKnown RBP9.95□□□□□ -0.82
RFFL-212ENST00000584655 PPP1R16AQ96I34 528 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 ZNF641Q96N77 438 aaPredicted RBP9.95□□□□□ -0.82
RFFL-212ENST00000584655 EDDM13A0A1B0GTR0 161 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 KRBA1A5PL33 1030 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 M0R129 80 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 PLOD2O00469 737 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 FOXD2O60548 495 aaPredicted RBP9.95□□□□□ -0.82
RFFL-212ENST00000584655 TAS2R50P59544 299 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 ERVK-8P63133 956 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 C5orf22Q49AR2 442 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 KANK2Q63ZY3 851 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 TSSK4Q6SA08 328 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 GPR180Q86V85 440 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 ZNF483Q8TF39 744 aaPredicted RBP9.95□□□□□ -0.82
RFFL-212ENST00000584655 SLC13A3Q8WWT9 602 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 OR4K3Q96R72 315 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 TMEM168Q9H0V1 697 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 EHD1Q9H4M9 534 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 DOLKQ9UPQ8 538 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 SPTAN1Q13813 2472 aaKnown RBP9.95□□□□□ -0.82
RFFL-212ENST00000584655 TSC2P49815 1807 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 A8MU76 341 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 B4DGG1 531 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 EI24O14681 340 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 HNRNPCL1O60812 293 aaKnown RBP9.95□□□□□ -0.82
RFFL-212ENST00000584655 PRKD3O94806 890 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 LMNAP02545 664 aaKnown RBP9.95□□□□□ -0.82
RFFL-212ENST00000584655 FUCA1P04066 466 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 CISD3P0C7P0 127 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 CHI3L1P36222 383 aaPredicted RBP9.95□□□□□ -0.82
RFFL-212ENST00000584655 SLC14A1Q13336 389 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 IRF4Q15306 451 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 TMEM196Q5HYL7 178 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 ZNF551Q7Z340 670 aaPredicted RBP9.95□□□□□ -0.82
RFFL-212ENST00000584655 ZNF547Q8IVP9 402 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 OR2T12Q8NG77 320 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 RHEBL1Q8TAI7 183 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 FAM83CQ9BQN1 747 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 TRMOQ9BU70 441 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 ZSCAN5AQ9BUG6 496 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 DDX18Q9NVP1 670 aaKnown RBP9.95□□□□□ -0.82
RFFL-212ENST00000584655 C1orf109Q9NX04 203 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 AP4B1Q9Y6B7 739 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms