RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 NDOR1Q9UHB4 597 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 IKZF3Q9UKT9 509 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 FARSAQ9Y285 508 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 KLK4Q9Y5K2 254 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 IGKV1-8A0A0C4DH67 115 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 CDC7O00311 574 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 ATXN7O15265 892 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 SRPX2O60687 465 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 CREG1O75629 220 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 ITGB2P05107 769 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 RHOXF2BP0C7M4 288 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 ALAS2P22557 587 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 PTPN4P29074 926 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 ARSFP54793 590 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 GRM7Q14831 915 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 UAP1Q16222 522 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 TBR1Q16650 682 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 SOWAHCQ53LP3 525 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 WASHC2DQ5SRD0 308 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 FRMPD2BQ6IN97 320 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 SBSNQ6UWP8 590 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 ZNF517Q6ZMY9 492 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 TTLL10Q6ZVT0 673 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 FRA10AC1Q70Z53 315 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 PAQR7Q86WK9 346 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 IFT20Q8IY31 132 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 ENDOVQ8N8Q3 282 aaKnown RBP12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 PROKR1Q8TCW9 393 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 ANKRD49Q8WVL7 239 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 ATL1Q8WXF7 558 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 CATSPER2Q96P56 530 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 DPH2Q9BQC3 489 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 RHOXF2Q9BQY4 288 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 GPR87Q9BY21 358 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 UNKQ9C0B0 810 aaKnown RBP12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 PCBD2Q9H0N5 130 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 CDC42EP4Q9H3Q1 356 aaKnown RBP12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 CUEDC1Q9NWM3 386 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 GPN3Q9UHW5 284 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 SNX7Q9UNH6 387 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 PCDHGA6Q9Y5G7 932 aa12.07□□□□□ -0.48
SMARCE1-218ENST00000582955 PCM1Q15154 2024 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 LOC105369274A0A096LPK9 316 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 LOC102723532A0A0G2JNH3 316 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 CDC14CA4D256 554 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 H7BY64 318 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 ACSL3O95573 720 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 RAB40ALP0C0E4 278 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 CCDC166P0CW27 439 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 EZRP15311 586 aaKnown RBP12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 CCND1P24385 295 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 ECHS1P30084 290 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 RAB10P61026 200 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 DCDP81605 110 aaKnown RBP12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 SLC9A5Q14940 896 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 TSNQ15631 228 aaKnown RBP12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 DEFB109BQ30KR1 87 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 UBAP2Q5T6F2 1119 aaKnown RBP12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 MLIPQ5VWP3 458 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 ZNF385CQ66K41 422 aaPredicted RBP12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 ZNF425Q6IV72 752 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 CAPN13Q6MZZ7 669 aaPredicted RBP12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 FBXO42Q6P3S6 717 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 BORAQ6PGQ7 559 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 PCSK4Q6UW60 755 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 FAM198BQ6UWH4 519 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 RAPH1Q70E73 1250 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 ADAMTSL2Q86TH1 951 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 C17orf64Q86WR6 236 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 RELL1Q8IUW5 271 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 OR4N4Q8N0Y3 316 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 SPATA6LQ8N4H0 392 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 ANKRD7Q92527 254 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 RERGQ96A58 199 aaPredicted RBP12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 PYCR2Q96C36 320 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 FBXL8Q96CD0 374 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 PRAP1Q96NZ9 151 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 GBP5Q96PP8 586 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 CYTH2Q99418 400 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 EGFL8Q99944 293 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 C17orf62Q9BQA9 187 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 NLNQ9BYT8 704 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 CUTCQ9NTM9 273 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 IFT80Q9P2H3 777 aaPredicted RBP12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 NFU1Q9UMS0 254 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 NOVA2Q9UNW9 492 aaKnown RBP12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 ANKRD12Q6UB98 2062 aa12.06□□□□□ -0.48
SMARCE1-218ENST00000582955 A0A1B0GX78 115 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 HYKKA2RU49 373 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 H0YGG7 62 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 HAT1O14929 419 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 DSCR3O14972 297 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 ANXA5P08758 320 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 FURINP09958 794 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 ARF3P61204 181 aaPredicted RBP12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 NFKB2Q00653 900 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 LY6DQ14210 128 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 NCF4Q15080 339 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 ZKSCAN8Q15776 578 aaPredicted RBP12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 PPP1R3AQ16821 1122 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms