RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 MARVELD2Q8N4S9 558 aa5.9□□□□□ -1.46
TVP23B-210ENST00000582288 OR4K2Q8NGD2 314 aa5.9□□□□□ -1.46
TVP23B-210ENST00000582288 OR2L8Q8NGY9 312 aa5.9□□□□□ -1.46
TVP23B-210ENST00000582288 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.9□□□□□ -1.46
TVP23B-210ENST00000582288 SIGLEC12Q96PQ1 595 aa5.9□□□□□ -1.46
TVP23B-210ENST00000582288 MENTQ9BUN1 341 aa5.9□□□□□ -1.46
TVP23B-210ENST00000582288 RAB11FIP5Q9BXF6 653 aa5.9□□□□□ -1.46
TVP23B-210ENST00000582288 FSD1LQ9BXM9 530 aa5.9□□□□□ -1.46
TVP23B-210ENST00000582288 CLEC4MQ9H2X3 399 aaPredicted RBP5.9□□□□□ -1.46
TVP23B-210ENST00000582288 RASSF1Q9NS23 344 aa5.9□□□□□ -1.46
TVP23B-210ENST00000582288 L3MBTL1Q9Y468 752 aa5.9□□□□□ -1.46
TVP23B-210ENST00000582288 ARL5AQ9Y689 179 aa5.9□□□□□ -1.46
TVP23B-210ENST00000582288 BZW2Q9Y6E2 419 aaKnown RBP5.9□□□□□ -1.46
TVP23B-210ENST00000582288 MAU2Q9Y6X3 613 aa5.9□□□□□ -1.46
TVP23B-210ENST00000582288 SLC5A10A0PJK1 596 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 NKX2-6A6NCS4 301 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 KIAA1324LA8MWY0 1029 aaPredicted RBP5.89□□□□□ -1.47
TVP23B-210ENST00000582288 F8W8V4 182 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 H7C0S8 307 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 APOL1O14791 398 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 BUD23O43709 281 aaKnown RBP5.89□□□□□ -1.47
TVP23B-210ENST00000582288 NEURL1O76050 574 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 GOSR1O95249 250 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 FTH1P02794 183 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 CELA2AP08217 269 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 C8orf89P0DMQ9 161 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 NFKB1P19838 968 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 MCM3P25205 808 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 CD68P34810 354 aaPredicted RBP5.89□□□□□ -1.47
TVP23B-210ENST00000582288 RELAQ04206 551 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 EEF1A2Q05639 463 aaKnown RBP5.89□□□□□ -1.47
TVP23B-210ENST00000582288 WASHC5Q12768 1159 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 MSLNQ13421 630 aaPredicted RBP5.89□□□□□ -1.47
TVP23B-210ENST00000582288 NOMO1Q15155 1222 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 SF1Q15637 639 aaKnown RBP5.89□□□□□ -1.47
TVP23B-210ENST00000582288 EXT1Q16394 746 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 PRTGQ2VWP7 1150 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 DEFB113Q30KQ7 82 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 GARNL3Q5VVW2 1013 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 SLC25A25Q6KCM7 469 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 ARHGAP11AQ6P4F7 1023 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 ARSKQ6UWY0 536 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 PAMR1Q6UXH9 720 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 RANBP10Q6VN20 620 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 CEP128Q6ZU80 1094 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 RNF44Q7L0R7 432 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 APTXQ7Z2E3 356 aaKnown RBP5.89□□□□□ -1.47
TVP23B-210ENST00000582288 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.89□□□□□ -1.47
TVP23B-210ENST00000582288 SLC25A41Q8N5S1 370 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 LMNTD1Q8N9Z9 388 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 LINC01555Q8NAE3 123 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 ACRBPQ8NEB7 543 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 GOT1L1Q8NHS2 421 aaPredicted RBP5.89□□□□□ -1.47
TVP23B-210ENST00000582288 C16orf52Q8NHV5 167 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 HMGCLL1Q8TB92 370 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 M1APQ8TC57 530 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 TFB1MQ8WVM0 346 aaKnown RBP5.89□□□□□ -1.47
TVP23B-210ENST00000582288 METTL21AQ8WXB1 218 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 RAPGEF5Q92565 580 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 OXNAD1Q96HP4 312 aaPredicted RBP5.89□□□□□ -1.47
TVP23B-210ENST00000582288 BTBD6Q96KE9 485 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 MAK16Q9BXY0 300 aaKnown RBP5.89□□□□□ -1.47
TVP23B-210ENST00000582288 UCK2Q9BZX2 261 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 TRIM45Q9H8W5 580 aaPredicted RBP5.89□□□□□ -1.47
TVP23B-210ENST00000582288 MMP25Q9NPA2 562 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 UBP1Q9NZI7 540 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.89□□□□□ -1.47
TVP23B-210ENST00000582288 UVRAGQ9P2Y5 699 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 TRPC4Q9UBN4 977 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 C19orf25Q9UFG5 118 aaPredicted RBP5.89□□□□□ -1.47
TVP23B-210ENST00000582288 FEZ2Q9UHY8 353 aaPredicted RBP5.89□□□□□ -1.47
TVP23B-210ENST00000582288 FKBPLQ9UIM3 349 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 TRHDEQ9UKU6 1024 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 TDRKHQ9Y2W6 561 aaKnown RBP5.89□□□□□ -1.47
TVP23B-210ENST00000582288 ALG6Q9Y672 507 aa5.89□□□□□ -1.47
TVP23B-210ENST00000582288 FLNAP21333 2647 aaKnown RBP5.88□□□□□ -1.47
TVP23B-210ENST00000582288 C3orf70A6NLC5 250 aaPredicted RBP5.88□□□□□ -1.47
TVP23B-210ENST00000582288 FAM90A27PA6NNH2 459 aa5.88□□□□□ -1.47
TVP23B-210ENST00000582288 USP27XA6NNY8 438 aa5.88□□□□□ -1.47
TVP23B-210ENST00000582288 A8MUI8 341 aa5.88□□□□□ -1.47
TVP23B-210ENST00000582288 TXNDC9O14530 226 aa5.88□□□□□ -1.47
TVP23B-210ENST00000582288 NME2P1O60361 137 aa5.88□□□□□ -1.47
TVP23B-210ENST00000582288 CTSVO60911 334 aa5.88□□□□□ -1.47
TVP23B-210ENST00000582288 ANXA9O76027 345 aa5.88□□□□□ -1.47
TVP23B-210ENST00000582288 MED26O95402 600 aa5.88□□□□□ -1.47
TVP23B-210ENST00000582288 RAF1P04049 648 aa5.88□□□□□ -1.47
TVP23B-210ENST00000582288 TPOP07202 933 aa5.88□□□□□ -1.47
TVP23B-210ENST00000582288 C8BP07358 591 aa5.88□□□□□ -1.47
TVP23B-210ENST00000582288 NME2P22392 152 aa5.88□□□□□ -1.47
TVP23B-210ENST00000582288 GRIA3P42263 894 aa5.88□□□□□ -1.47
TVP23B-210ENST00000582288 ARHGAP25P42331 645 aa5.88□□□□□ -1.47
TVP23B-210ENST00000582288 AGTR2P50052 363 aa5.88□□□□□ -1.47
TVP23B-210ENST00000582288 ZNF140P52738 457 aaPredicted RBP5.88□□□□□ -1.47
TVP23B-210ENST00000582288 VSX2P58304 361 aaPredicted RBP5.88□□□□□ -1.47
TVP23B-210ENST00000582288 TAS2R40P59535 323 aa5.88□□□□□ -1.47
TVP23B-210ENST00000582288 HSF1Q00613 529 aa5.88□□□□□ -1.47
TVP23B-210ENST00000582288 FAM53BQ14153 422 aa5.88□□□□□ -1.47
TVP23B-210ENST00000582288 ITIH4Q14624 930 aa5.88□□□□□ -1.47
TVP23B-210ENST00000582288 PTPRCAPQ14761 206 aa5.88□□□□□ -1.47
TVP23B-210ENST00000582288 SHEQ5VZ18 495 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms