RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 STARD3Q14849 445 aa21.91■■□□□ 1.1
CCDC47-204ENST00000582252 HIST2H2ACQ16777 129 aaPredicted RBP21.91■■□□□ 1.1
CCDC47-204ENST00000582252 FBXO43Q4G163 708 aa21.91■■□□□ 1.1
CCDC47-204ENST00000582252 HIST2H2AA3Q6FI13 130 aa21.91■■□□□ 1.1
CCDC47-204ENST00000582252 SDE2Q6IQ49 451 aa21.91■■□□□ 1.1
CCDC47-204ENST00000582252 MED27Q6P2C8 311 aa21.91■■□□□ 1.1
CCDC47-204ENST00000582252 PDZD3Q86UT5 571 aa21.91■■□□□ 1.1
CCDC47-204ENST00000582252 SYT12Q8IV01 421 aa21.91■■□□□ 1.1
CCDC47-204ENST00000582252 TMEM132CQ8N3T6 1108 aa21.91■■□□□ 1.1
CCDC47-204ENST00000582252 PLA2G15Q8NCC3 412 aa21.91■■□□□ 1.1
CCDC47-204ENST00000582252 NSMCE2Q96MF7 247 aa21.91■■□□□ 1.1
CCDC47-204ENST00000582252 TSSK3Q96PN8 268 aa21.91■■□□□ 1.1
CCDC47-204ENST00000582252 SGPP1Q9BX95 441 aa21.91■■□□□ 1.1
CCDC47-204ENST00000582252 TRIM8Q9BZR9 551 aa21.91■■□□□ 1.1
CCDC47-204ENST00000582252 EHD1Q9H4M9 534 aa21.91■■□□□ 1.1
CCDC47-204ENST00000582252 ANTXRLA6NF34 631 aa21.9■■□□□ 1.1
CCDC47-204ENST00000582252 MAN2B1O00754 1011 aa21.9■■□□□ 1.1
CCDC47-204ENST00000582252 TIPRLO75663 272 aa21.9■■□□□ 1.1
CCDC47-204ENST00000582252 BMP2P12643 396 aa21.9■■□□□ 1.1
CCDC47-204ENST00000582252 KELP23276 732 aa21.9■■□□□ 1.1
CCDC47-204ENST00000582252 ACADLP28330 430 aa21.9■■□□□ 1.1
CCDC47-204ENST00000582252 MTPNP58546 118 aa21.9■■□□□ 1.1
CCDC47-204ENST00000582252 YBX1P67809 324 aaKnown RBP21.9■■□□□ 1.1
CCDC47-204ENST00000582252 MRPS21P82921 87 aaKnown RBP21.9■■□□□ 1.1
CCDC47-204ENST00000582252 SRSF11Q05519 484 aaKnown RBP21.9■■□□□ 1.1
CCDC47-204ENST00000582252 CYP4F3Q08477 520 aa21.9■■□□□ 1.1
CCDC47-204ENST00000582252 ACSM2AQ08AH3 577 aa21.9■■□□□ 1.1
CCDC47-204ENST00000582252 LAPTM5Q13571 262 aa21.9■■□□□ 1.1
CCDC47-204ENST00000582252 PLA2G4EQ3MJ16 856 aa21.9■■□□□ 1.1
CCDC47-204ENST00000582252 IER5LQ5T953 404 aa21.9■■□□□ 1.1
CCDC47-204ENST00000582252 ACSM2BQ68CK6 577 aa21.9■■□□□ 1.1
CCDC47-204ENST00000582252 TMPRSS11BQ86T26 416 aa21.9■■□□□ 1.1
CCDC47-204ENST00000582252 GPR180Q86V85 440 aa21.9■■□□□ 1.1
CCDC47-204ENST00000582252 ADGRG5Q8IZF4 528 aa21.9■■□□□ 1.1
CCDC47-204ENST00000582252 SETD7Q8WTS6 366 aaKnown RBP21.9■■□□□ 1.1
CCDC47-204ENST00000582252 FAM3CQ92520 227 aa21.9■■□□□ 1.1
CCDC47-204ENST00000582252 RAD51AP1Q96B01 352 aa21.9■■□□□ 1.1
CCDC47-204ENST00000582252 WDR34Q96EX3 536 aa21.9■■□□□ 1.1
CCDC47-204ENST00000582252 OR52A5Q9H2C5 316 aa21.9■■□□□ 1.1
CCDC47-204ENST00000582252 CCDC177Q9NQR7 707 aaPredicted RBP21.9■■□□□ 1.1
CCDC47-204ENST00000582252 VAPAQ9P0L0 249 aa21.9■■□□□ 1.1
CCDC47-204ENST00000582252 TRIOO75962 3097 aa21.9■■□□□ 1.1
CCDC47-204ENST00000582252 PI15O43692 258 aa21.89■■□□□ 1.1
CCDC47-204ENST00000582252 DFNA5O60443 496 aa21.89■■□□□ 1.1
CCDC47-204ENST00000582252 SMNDC1O75940 238 aaKnown RBP eCLIP21.89■■□□□ 1.1
CCDC47-204ENST00000582252 TAS2R38P59533 333 aa21.89■■□□□ 1.1
CCDC47-204ENST00000582252 DDX39BQ13838 428 aaKnown RBP21.89■■□□□ 1.1
CCDC47-204ENST00000582252 MLF2Q15773 248 aaPredicted RBP21.89■■□□□ 1.1
CCDC47-204ENST00000582252 WSCD2Q2TBF2 565 aa21.89■■□□□ 1.1
CCDC47-204ENST00000582252 SPIN4Q56A73 249 aa21.89■■□□□ 1.1
CCDC47-204ENST00000582252 C2orf27AQ580R0 203 aa21.89■■□□□ 1.1
CCDC47-204ENST00000582252 ATG9BQ674R7 924 aa21.89■■□□□ 1.1
CCDC47-204ENST00000582252 GLYATQ6IB77 296 aa21.89■■□□□ 1.1
CCDC47-204ENST00000582252 DOK6Q6PKX4 331 aa21.89■■□□□ 1.1
CCDC47-204ENST00000582252 SLCO4C1Q6ZQN7 724 aa21.89■■□□□ 1.1
CCDC47-204ENST00000582252 C11orf96Q7Z7L8 435 aa21.89■■□□□ 1.1
CCDC47-204ENST00000582252 TBC1D21Q8IYX1 336 aa21.89■■□□□ 1.1
CCDC47-204ENST00000582252 OXR1Q8N573 874 aa21.89■■□□□ 1.1
CCDC47-204ENST00000582252 TRPV3Q8NET8 790 aa21.89■■□□□ 1.1
CCDC47-204ENST00000582252 POP5Q969H6 163 aaKnown RBP21.89■■□□□ 1.1
CCDC47-204ENST00000582252 ERLEC1Q96DZ1 483 aa21.89■■□□□ 1.1
CCDC47-204ENST00000582252 CCDC115Q96NT0 180 aa21.89■■□□□ 1.1
CCDC47-204ENST00000582252 GABRG3Q99928 467 aa21.89■■□□□ 1.1
CCDC47-204ENST00000582252 THUMPD3Q9BV44 507 aaKnown RBP21.89■■□□□ 1.1
CCDC47-204ENST00000582252 SEMA6AQ9H2E6 1030 aa21.89■■□□□ 1.1
CCDC47-204ENST00000582252 C8orf4Q9NR00 106 aa21.89■■□□□ 1.1
CCDC47-204ENST00000582252 ASF1AQ9Y294 204 aa21.89■■□□□ 1.1
CCDC47-204ENST00000582252 TMEM98Q9Y2Y6 226 aa21.89■■□□□ 1.1
CCDC47-204ENST00000582252 TCRBV5S2A0A599 114 aa21.89■■□□□ 1.09
CCDC47-204ENST00000582252 KMOO15229 486 aa21.89■■□□□ 1.09
CCDC47-204ENST00000582252 LYNP07948 512 aa21.89■■□□□ 1.09
CCDC47-204ENST00000582252 MTHFD1P11586 935 aaKnown RBP21.89■■□□□ 1.09
CCDC47-204ENST00000582252 PCNAP12004 261 aa21.89■■□□□ 1.09
CCDC47-204ENST00000582252 ASMTP46597 345 aa21.89■■□□□ 1.09
CCDC47-204ENST00000582252 PHEXP78562 749 aa21.89■■□□□ 1.09
CCDC47-204ENST00000582252 RUNDC3AQ59EK9 446 aa21.89■■□□□ 1.09
CCDC47-204ENST00000582252 LRIF1Q5T3J3 769 aa21.89■■□□□ 1.09
CCDC47-204ENST00000582252 DCUN1D3Q8IWE4 304 aa21.89■■□□□ 1.09
CCDC47-204ENST00000582252 MARVELD2Q8N4S9 558 aa21.89■■□□□ 1.09
CCDC47-204ENST00000582252 OR2T12Q8NG77 320 aa21.89■■□□□ 1.09
CCDC47-204ENST00000582252 NEIL2Q969S2 332 aa21.89■■□□□ 1.09
CCDC47-204ENST00000582252 UBE2E3Q969T4 207 aa21.89■■□□□ 1.09
CCDC47-204ENST00000582252 MTERF1Q99551 399 aaKnown RBP21.89■■□□□ 1.09
CCDC47-204ENST00000582252 TEX101Q9BY14 249 aa21.89■■□□□ 1.09
CCDC47-204ENST00000582252 ZDHHC5Q9C0B5 715 aa21.89■■□□□ 1.09
CCDC47-204ENST00000582252 PDP2Q9P2J9 529 aa21.89■■□□□ 1.09
CCDC47-204ENST00000582252 CIDEBQ9UHD4 219 aa21.89■■□□□ 1.09
CCDC47-204ENST00000582252 A0A1W2PP55 124 aa21.88■■□□□ 1.09
CCDC47-204ENST00000582252 GSTA4O15217 222 aa21.88■■□□□ 1.09
CCDC47-204ENST00000582252 ANXA6P08133 673 aa21.88■■□□□ 1.09
CCDC47-204ENST00000582252 UBTFL6P0CB48 400 aaPredicted RBP21.88■■□□□ 1.09
CCDC47-204ENST00000582252 C1GALT1C1LP0DN25 315 aa21.88■■□□□ 1.09
CCDC47-204ENST00000582252 HSD17B2P37059 387 aa21.88■■□□□ 1.09
CCDC47-204ENST00000582252 POLE2P56282 527 aa21.88■■□□□ 1.09
CCDC47-204ENST00000582252 OR4D2P58180 307 aa21.88■■□□□ 1.09
CCDC47-204ENST00000582252 C21orf58P58505 322 aa21.88■■□□□ 1.09
CCDC47-204ENST00000582252 PLIN5Q00G26 463 aa21.88■■□□□ 1.09
CCDC47-204ENST00000582252 PGS1Q32NB8 556 aa21.88■■□□□ 1.09
CCDC47-204ENST00000582252 CACUL1Q86Y37 369 aa21.88■■□□□ 1.09
CCDC47-204ENST00000582252 RIMKLAQ8IXN7 391 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms