RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 G6PDP11413 515 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 ACP5P13686 325 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 HSD3B1P14060 373 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 GNSP15586 552 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 NDUFV2P19404 249 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 HSD3B2P26439 372 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 HOXD12P35452 270 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 TRIM23P36406 574 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 MRPL19P49406 292 aaKnown RBP8.99□□□□□ -0.97
SS18-220ENST00000582092 CLCNKAP51800 687 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 NEK2P51955 445 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 MTTPP55157 894 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 ACTR3P61158 418 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 UFM1P61960 85 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 HMGCS1Q01581 520 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 SLC34A1Q06495 639 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 CSTF3Q12996 717 aaKnown RBP8.99□□□□□ -0.97
SS18-220ENST00000582092 DOC2AQ14183 400 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 ARHGAP19Q14CB8 494 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.99□□□□□ -0.97
SS18-220ENST00000582092 C10orf62Q5T681 223 aaPredicted RBP8.99□□□□□ -0.97
SS18-220ENST00000582092 LYSMD4Q5XG99 296 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 METRNLQ641Q3 311 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 GRHL2Q6ISB3 625 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 ENPP7Q6UWV6 458 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 Q6ZSR9 355 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 ARPINQ7Z6K5 226 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 HPS6Q86YV9 775 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 SYT12Q8IV01 421 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 TBC1D21Q8IYX1 336 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 LIX1Q8N485 282 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 TBC1D19Q8N5T2 526 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 EFCAB3Q8N7B9 438 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 TP53I13Q8NBR0 393 aaPredicted RBP8.99□□□□□ -0.97
SS18-220ENST00000582092 GLB1L3Q8NCI6 653 aaPredicted RBP8.99□□□□□ -0.97
SS18-220ENST00000582092 DENND6BQ8NEG7 585 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 OR9I1Q8NGQ6 314 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 OR2T11Q8NH01 316 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 CEP76Q8TAP6 659 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 STARD8Q92502 1023 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 PIGKQ92643 395 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 MRGPRX1Q96LB2 322 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 TIMM29Q9BSF4 260 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 EFCAB11Q9BUY7 163 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 LGR4Q9BXB1 951 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 RAB11FIP5Q9BXF6 653 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 SLC6A17Q9H1V8 727 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 RMND5AQ9H871 391 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 INTS7Q9NVH2 962 aaKnown RBP8.99□□□□□ -0.97
SS18-220ENST00000582092 SUSD2Q9UGT4 822 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 POMPQ9Y244 141 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 HEBP2Q9Y5Z4 205 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 COLEC10Q9Y6Z7 277 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 TRPM6Q9BX84 2022 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 TNRC6BQ9UPQ9 1833 aaKnown RBP8.98□□□□□ -0.97
SS18-220ENST00000582092 SPTBN4Q9H254 2564 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 SERTM1A2A2V5 107 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 E7EQ34 232 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 MAP3K7O43318 606 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 KRT36O76013 467 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 KCNH1O95259 989 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 IL6P05231 212 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 HOXC4P09017 264 aaPredicted RBP8.98□□□□□ -0.97
SS18-220ENST00000582092 C1GALT1C1LP0DN25 315 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 TCN1P20061 433 aaPredicted RBP8.98□□□□□ -0.97
SS18-220ENST00000582092 HNRNPA2B1P22626 353 aaKnown RBP8.98□□□□□ -0.97
SS18-220ENST00000582092 IMPA1P29218 277 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 CD6P30203 668 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 S100A3P33764 101 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 TPMTP51580 245 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 LIMK1P53667 647 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 ATXN3P54252 364 aaPredicted RBP8.98□□□□□ -0.97
SS18-220ENST00000582092 TBPL1P62380 186 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 FOXM1Q08050 763 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 ACSM2AQ08AH3 577 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 LRP8Q14114 963 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 DUOXA1Q1HG43 343 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 PGS1Q32NB8 556 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 SPATS1Q496A3 300 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 TMEM259Q4ZIN3 620 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 WDR45BQ5MNZ6 344 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 PRAMEF14Q5SWL7 426 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 PRAMEF13Q5VWM6 474 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 ACSM2BQ68CK6 577 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 ZFP1Q6P2D0 407 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 PGM2L1Q6PCE3 622 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 RD3Q7Z3Z2 195 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 TMPRSS11BQ86T26 416 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 SPATA24Q86W54 205 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 C17orf64Q86WR6 236 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 TRIM69Q86WT6 500 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 ZNF547Q8IVP9 402 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 KLHDC8AQ8IYD2 350 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 TMEFF1Q8IYR6 380 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 OXR1Q8N573 874 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 ZNF480Q8WV37 535 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 WDR60Q8WVS4 1066 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 USP7Q93009 1102 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 C12orf66Q96MD2 445 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms