RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ZNF449Q6P9G9 518 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 MEX3BQ6ZN04 569 aaKnown RBP4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 SH2D5Q6ZV89 423 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 PIGZQ86VD9 579 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 KLHDC1Q8N7A1 406 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 NHLRC2Q8NBF2 726 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 OR13C3Q8NGS6 347 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 OR4C3Q8NH37 302 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 PYCR2Q96C36 320 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 PGM2Q96G03 612 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 PARK7Q99497 189 aaKnown RBP4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 LMAN1LQ9HAT1 526 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 SLC52A3Q9NQ40 469 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 SEPT10Q9P0V9 454 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 ITGA11Q9UKX5 1188 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 CHKBQ9Y259 395 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 C2CD2Q9Y426 696 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 A4D1N5 150 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 PMS2P5A8MQ11 134 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 CCL24O00175 119 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 NTN3O00634 580 aaPredicted RBP4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 PPIP5K2O43314 1243 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 SELENOFO60613 162 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 DFFBO76075 338 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 EDN1P05305 212 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 ERVK-10P10266 1014 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 EPORP19235 508 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 LHCGRP22888 699 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 KRT2P35908 639 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 TRAP1Q12931 704 aaKnown RBP4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 P2RY6Q15077 328 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 ARHGEF16Q5VV41 709 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 SUSD4Q5VX71 490 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 TXNRD3NBQ6F5E7 133 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 CTR9Q6PD62 1173 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 C11orf88Q6PI97 169 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 OTOAQ7RTW8 1153 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 AMIGO1Q86WK6 493 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 IQCA1Q86XH1 822 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 HPSE2Q8WWQ2 592 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 DNASE1L2Q92874 299 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 RIT1Q92963 219 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 CPVLQ9H3G5 476 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 CHST11Q9NPF2 352 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 ARGLU1Q9NWB6 273 aaPredicted RBP4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 PKD2L2Q9NZM6 624 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 R4GN57 208 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 STK36Q9NRP7 1315 aa4.21□□□□□ -1.74
SMCHD1-205ENST00000581383 A0A0U1RQK1 487 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 ZNF320A2RRD8 509 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 FAM72CH0Y354 149 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 BLOC1S5-TXNDC5H3BN57 136 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 ST8SIA3O43173 380 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 TRMUO75648 421 aaKnown RBP4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 APOHP02749 345 aaPredicted RBP4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 ALDH4A1P30038 563 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 TIA1P31483 386 aaKnown RBP eCLIP4.2□□□□□ -1.742e-7■■□□□ 14.2
SMCHD1-205ENST00000581383 SOAT1P35610 550 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 TCF7P36402 384 aaPredicted RBP4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 MAP2K2P36507 400 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 CDX1P47902 265 aaPredicted RBP4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 HERV-K104P61576 105 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 KCNJ10P78508 379 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 CACNG1Q06432 222 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 RBBP7Q16576 425 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 CDO1Q16878 200 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 KRTAP24-1Q3LI83 254 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 GTDC1Q4AE62 458 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 FAM72AQ5TYM5 149 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 LYSMD4Q5XG99 296 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 FAM166AQ6J272 317 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 FAM72DQ6L9T8 149 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 ADAM5Q6NVV9 412 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 NOTUMQ6P988 496 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 IL17RELQ6ZVW7 336 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 PIWIL3Q7Z3Z3 882 aaKnown RBP4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 HOOK3Q86VS8 718 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 FAM72BQ86X60 149 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 CCDC63Q8NA47 563 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 ATAD1Q8NBU5 361 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 UXS1Q8NBZ7 420 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 TSACCQ96A04 125 aaPredicted RBP4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 PGLYRP2Q96PD5 576 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 MLPHQ9BV36 600 aaPredicted RBP4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 RIMS4Q9H426 269 aaPredicted RBP4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 ACTL8Q9H568 366 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 RAB9BQ9NP90 201 aa4.2□□□□□ -1.74
SMCHD1-205ENST00000581383 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 ANTXRLA6NF34 631 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 PI4K2BG5E9Z4 385 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 FLRT2O43155 660 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 STX6O43752 255 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 PCDH7O60245 1069 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 CLPTM1O96005 669 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 GPIP06744 558 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 ANKRD34CP0C6C1 535 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 PRSS56P0CW18 603 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 ATP5DP30049 168 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 SULT2A1Q06520 285 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 MEP1BQ16820 701 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms