RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 ATP6AP1LQ52LC2 224 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 MTX3Q5HYI7 312 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SAMD4BQ5PRF9 694 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 EFL1Q7Z2Z2 1120 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SYNPOQ8N3V7 929 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 OR4F6Q8NGB9 312 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 OR5AR1Q8NGP9 310 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 MCOLN3Q8TDD5 553 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SLCO4A1Q96BD0 722 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ZNF514Q96K75 400 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 LINC00615Q96LM1 132 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 TEX37Q96LM6 180 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ZNF382Q96SR6 550 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PKP4Q99569 1192 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PRPF18Q99633 342 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SLC29A1Q99808 456 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 C1QTNF3Q9BXJ4 246 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 NUSAP1Q9BXS6 441 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ZDHHC5Q9C0B5 715 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 OR52A5Q9H2C5 316 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SGK2Q9HBY8 427 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SDR39U1Q9NRG7 319 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 INTS7Q9NVH2 962 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 RIC8BQ9NVN3 520 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PTTG2Q9NZH5 202 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SUCOQ9UBS9 1254 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 TNPO3Q9Y5L0 923 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 TRBV23OR9-2A0A075B6M9 112 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 IGHV1OR15-9A0A0B4J2B8 117 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 OR52A4PA6NMU1 304 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 CACNB4O00305 520 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 FPGTO14772 594 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PSIP1O75475 530 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 TIPRLO75663 272 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 C1orf105O95561 183 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 C8GP07360 202 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 GSTM1P09488 218 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 EPORP19235 508 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 MAP4P27816 1152 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 CD6P30203 668 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 HTR6P50406 440 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 UFM1P61960 85 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 GSTM4Q03013 218 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 NR6A1Q15406 480 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SGO1Q5FBB7 561 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SULT1C3Q6IMI6 304 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 Q6ZSR6 202 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 IFNEQ86WN2 208 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 TRIM69Q86WT6 500 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 TMEM102Q8N9M5 508 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 OR13H1Q8NG92 308 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 EME1Q96AY2 570 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 DGCR14Q96DF8 476 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 MED8Q96G25 268 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 GRIP2Q9C0E4 1043 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 COQ10BQ9H8M1 238 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 RDH14Q9HBH5 336 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 DNAAF2Q9NVR5 837 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 NDUFA13Q9P0J0 144 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 MAP10Q9P2G4 905 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ASF1AQ9Y294 204 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 TDRKHQ9Y2W6 561 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PRSS51A0A1B0GVH4 220 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 BBIP1A8MTZ0 92 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 STK16O75716 305 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 WDR47O94967 919 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 EML2O95834 649 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 C7P10643 843 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 CYP2A7P20853 494 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ACADLP28330 430 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 MYBPC1Q00872 1141 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PCBP2Q15366 365 aaKnown RBP eCLIP12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PYCR3Q53H96 274 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 C6orf10Q5SRN2 563 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 RBM44Q6ZP01 1051 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 MILR1Q7Z6M3 343 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 TRIM73Q86UV7 250 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 METTL25Q8N6Q8 603 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 DNAJB14Q8TBM8 379 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 HM13Q8TCT9 377 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PPWD1Q96BP3 646 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ROPN1LQ96C74 230 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 TRIM54Q9BYV2 358 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PRDM8Q9NQV8 689 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 OPTCQ9UBM4 332 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SLC17A4Q9Y2C5 497 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 GPR45Q9Y5Y3 372 aa12.28□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PRAMEF4O60810 478 aa12.27□□□□□ -0.44
CDK5RAP3-217ENST00000580287 MT-ND1P03886 318 aa12.27□□□□□ -0.44
CDK5RAP3-217ENST00000580287 GRIA3P42263 894 aa12.27□□□□□ -0.44
CDK5RAP3-217ENST00000580287 NAA20P61599 178 aa12.27□□□□□ -0.44
CDK5RAP3-217ENST00000580287 NAE1Q13564 534 aa12.27□□□□□ -0.44
CDK5RAP3-217ENST00000580287 NFYCQ13952 458 aa12.27□□□□□ -0.44
CDK5RAP3-217ENST00000580287 TIGD2Q4W5G0 525 aa12.27□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PRAMEF9Q5VWM5 478 aa12.27□□□□□ -0.44
CDK5RAP3-217ENST00000580287 METRNLQ641Q3 311 aa12.27□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SUSD1Q6UWL2 747 aa12.27□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SPATA19Q7Z5L4 167 aa12.27□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SLC22A18ASQ8N1D0 253 aa12.27□□□□□ -0.44
CDK5RAP3-217ENST00000580287 TFGQ92734 400 aaPredicted RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms