RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 CD46P15529 392 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 RPS2P15880 293 aaKnown RBP2.31□□□□□ -2.04
SNORD53-201ENST00000579969 ZNF7P17097 686 aaPredicted RBP2.31□□□□□ -2.04
SNORD53-201ENST00000579969 ZNF8P17098 575 aaPredicted RBP2.31□□□□□ -2.04
SNORD53-201ENST00000579969 CTPS1P17812 591 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 POLR2CP19387 275 aaPredicted RBP2.31□□□□□ -2.04
SNORD53-201ENST00000579969 CDH3P22223 829 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 FDXRP22570 491 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 PRKACBP22694 351 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 LHCGRP22888 699 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 VAMP1P23763 118 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 NR2F2P24468 414 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 EEF1DP29692 281 aaKnown RBP2.31□□□□□ -2.04
SNORD53-201ENST00000579969 UQCRC1P31930 480 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 THBS2P35442 1172 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 SOX18P35713 384 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 KRT20P35900 424 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 HSD17B2P37059 387 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 HALP42357 657 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 SYKP43405 635 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 RGRP47804 291 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 ZFP36L2P47974 494 aaKnown RBP2.31□□□□□ -2.04
SNORD53-201ENST00000579969 SULT1E1P49888 294 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 NDUFA8P51970 172 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 KPNA2P52292 529 aaKnown RBP2.31□□□□□ -2.04
SNORD53-201ENST00000579969 CTSCP53634 463 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 DRG2P55039 364 aaKnown RBP2.31□□□□□ -2.04
SNORD53-201ENST00000579969 NUP107P57740 925 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 YBEYP58557 167 aaPredicted RBP2.31□□□□□ -2.04
SNORD53-201ENST00000579969 BPIFB3P59826 476 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 PTSQ03393 145 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 PRKAA1Q13131 559 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 SP140Q13342 867 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 PDCLQ13371 301 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 MSLNQ13421 630 aaPredicted RBP2.31□□□□□ -2.04
SNORD53-201ENST00000579969 TNK1Q13470 666 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 CASP8Q14790 479 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 NR1I3Q14994 352 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 SLC39A14Q15043 492 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 RBBP7Q16576 425 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 NKG7Q16617 165 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 SLC5A12Q1EHB4 618 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 INSCQ1MX18 579 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 SLC25A52Q3SY17 297 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 ANKDD1AQ495B1 522 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 GXYLT1Q4G148 440 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 CBWD6Q4V339 395 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 FLYWCH1Q4VC44 716 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 TDRD12Q587J7 1177 aaKnown RBP2.31□□□□□ -2.04
SNORD53-201ENST00000579969 CBWD3Q5JTY5 395 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 CBWD5Q5RIA9 395 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 ZNF648Q5T619 568 aaPredicted RBP2.31□□□□□ -2.04
SNORD53-201ENST00000579969 UBAP2Q5T6F2 1119 aaKnown RBP2.31□□□□□ -2.04
SNORD53-201ENST00000579969 NDUFAF5Q5TEU4 345 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 FAM72AQ5TYM5 149 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 ABHD17BQ5VST6 288 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 LIPNQ5VXI9 398 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 TXNRD3NBQ6F5E7 133 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 FAM72DQ6L9T8 149 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 RHBDD2Q6NTF9 364 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 TMEM53Q6P2H8 277 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 KLC3Q6P597 504 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 CFAP161Q6P656 301 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 C12orf54Q6X4T0 127 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 SHISA6Q6ZSJ9 500 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 FAM183BPQ6ZVS7 135 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 RAPH1Q70E73 1250 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 NDUFAF7Q7L592 441 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 SLC26A9Q7LBE3 791 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 OVCH1Q7RTY7 1134 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.31□□□□□ -2.04
SNORD53-201ENST00000579969 TSPAN33Q86UF1 283 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 CTAGE6Q86UF2 777 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 CD163Q86VB7 1156 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 SPATA24Q86W54 205 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 OOSP2Q86WS3 158 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 FAM72BQ86X60 149 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 FAM131BQ86XD5 332 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 STX12Q86Y82 276 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 TMEM139Q8IV31 216 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 LIX1LQ8IVB5 337 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 CTAGE4Q8IX94 777 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 ST13P4Q8IZP2 240 aaPredicted RBP2.31□□□□□ -2.04
SNORD53-201ENST00000579969 LGI4Q8N135 537 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 CARFQ8N187 725 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 RPRMLQ8N4K4 120 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 WDTC1Q8N5D0 677 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 TC2NQ8N9U0 490 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 MLKLQ8NB16 471 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 MAPK1IP1LQ8NDC0 245 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 EHBP1Q8NDI1 1231 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 SGMS2Q8NHU3 365 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 LINC01560Q8TB33 94 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 FAM57AQ8TBR7 257 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 PROKR1Q8TCW9 393 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 SLC20A1Q8WUM9 679 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 WDR60Q8WVS4 1066 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 IPCEF1Q8WWN9 437 aaPredicted RBP2.31□□□□□ -2.04
SNORD53-201ENST00000579969 NT5C3BQ969T7 300 aa2.31□□□□□ -2.04
SNORD53-201ENST00000579969 RNF25Q96BH1 459 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms