RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 LMF1Q96S06 567 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 PLCD4Q9BRC7 762 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 C3orf18Q9UK00 162 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 JRKLQ9Y4A0 524 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 MAD1L1Q9Y6D9 718 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 MAST4O15021 2626 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 CCDC88CQ9P219 2028 aa13.08□□□□□ -0.31
GGA3-208ENST00000579743 LOC105369274A0A096LPK9 316 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 NSG1A0A0A6YYJ2 146 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 LOC102723532A0A0G2JNH3 316 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 A0A1W2PPV9 198 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 DYTNA2CJ06 578 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 VSTM2BA6NLU5 285 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 ARHGEF33A8MVX0 844 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 SEMA7AO75326 666 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 SNRNP200O75643 2136 aaKnown RBP13.08□□□□□ -0.32
GGA3-208ENST00000579743 CBX6O95503 412 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 HEXBP07686 556 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 ICAM2P13598 275 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 EMP2P54851 167 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 PER3P56645 1201 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 KLC1Q07866 573 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 CDC16Q13042 620 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 PTK6Q13882 451 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 GBX1Q14549 363 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 ZNF169Q14929 603 aaPredicted RBP13.08□□□□□ -0.32
GGA3-208ENST00000579743 LONRF1Q17RB8 773 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 ACSBG2Q5FVE4 666 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 ICE2Q659A1 982 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 SUSD1Q6UWL2 747 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 COX15Q7KZN9 410 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 NDUFAF7Q7L592 441 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 REXO1L1PQ8IX06 675 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 PRSS58Q8IYP2 241 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 OR4N4Q8N0Y3 316 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 CSNK1A1LQ8N752 337 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 PRELID2Q8N945 189 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 FBXO15Q8NCQ5 510 aaPredicted RBP13.08□□□□□ -0.32
GGA3-208ENST00000579743 OR11G2Q8NGC1 345 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 MCOLN3Q8TDD5 553 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 KCNJ9Q92806 393 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 INPP5DQ92835 1189 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 C19orf60Q96EN9 201 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 MMABQ96EY8 250 aaPredicted RBP13.08□□□□□ -0.32
GGA3-208ENST00000579743 CNDP1Q96KN2 507 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 FAM167BQ9BTA0 163 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 MKKSQ9NPJ1 570 aaPredicted RBP13.08□□□□□ -0.32
GGA3-208ENST00000579743 C20orf96Q9NUD7 363 aaPredicted RBP13.08□□□□□ -0.32
GGA3-208ENST00000579743 TRPC4Q9UBN4 977 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 TAC3Q9UHF0 121 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 PCDHGA10Q9Y5H3 936 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 BSNQ9UPA5 3926 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 FLNCQ14315 2725 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 FER1L5A0AVI2 2057 aa13.08□□□□□ -0.32
GGA3-208ENST00000579743 TCRBV7S3A2A0A539 114 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 H0YGG7 62 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 SMAPO00193 183 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 EIF3FO00303 357 aaPredicted RBP13.07□□□□□ -0.32
GGA3-208ENST00000579743 AVILO75366 819 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 MPC1LP0DKB6 136 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 ERGP11308 486 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 TSFMP43897 325 aaKnown RBP13.07□□□□□ -0.32
GGA3-208ENST00000579743 AVPR1BP47901 424 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 RGS4P49798 205 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 FOXL2P58012 376 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 ARF3P61204 181 aaPredicted RBP13.07□□□□□ -0.32
GGA3-208ENST00000579743 DSG2Q14126 1118 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 FASTKQ14296 549 aaKnown RBP13.07□□□□□ -0.32
GGA3-208ENST00000579743 HIF1AQ16665 826 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 CRB2Q5IJ48 1285 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 FBXO42Q6P3S6 717 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 CCDC137Q6PK04 289 aaKnown RBP13.07□□□□□ -0.32
GGA3-208ENST00000579743 FAM180AQ6UWF9 173 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 IGFL2Q6UWQ7 119 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 CENPUQ71F23 418 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 METTL21AQ8WXB1 218 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 PKP4Q99569 1192 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 DRC3Q9H069 523 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 PCBD2Q9H0N5 130 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 ZNF160Q9HCG1 818 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 ABCF3Q9NUQ8 709 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 RIC8BQ9NVN3 520 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 NOVA2Q9UNW9 492 aaKnown RBP13.07□□□□□ -0.32
GGA3-208ENST00000579743 PPP2R2CQ9Y2T4 447 aa13.07□□□□□ -0.32
GGA3-208ENST00000579743 SHANK1Q9Y566 2161 aa13.06□□□□□ -0.32
GGA3-208ENST00000579743 IGLV3-12A0A075B6K2 115 aa13.06□□□□□ -0.32
GGA3-208ENST00000579743 GOLGA8MH3BSY2 632 aa13.06□□□□□ -0.32
GGA3-208ENST00000579743 PGRMC1O00264 195 aaKnown RBP13.06□□□□□ -0.32
GGA3-208ENST00000579743 WFS1O76024 890 aa13.06□□□□□ -0.32
GGA3-208ENST00000579743 SLC16A8O95907 504 aa13.06□□□□□ -0.32
GGA3-208ENST00000579743 GRK3P35626 688 aa13.06□□□□□ -0.32
GGA3-208ENST00000579743 SKIV2L2P42285 1042 aaKnown RBP13.06□□□□□ -0.32
GGA3-208ENST00000579743 CLCN7P51798 805 aa13.06□□□□□ -0.32
GGA3-208ENST00000579743 ARG2P78540 354 aa13.06□□□□□ -0.32
GGA3-208ENST00000579743 MFAP5Q13361 173 aa13.06□□□□□ -0.32
GGA3-208ENST00000579743 CTBP1Q13363 440 aa13.06□□□□□ -0.32
GGA3-208ENST00000579743 PRTGQ2VWP7 1150 aa13.06□□□□□ -0.32
GGA3-208ENST00000579743 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.06□□□□□ -0.32
GGA3-208ENST00000579743 RIPOR1Q6ZS17 1223 aa13.06□□□□□ -0.32
GGA3-208ENST00000579743 MAMDC2Q7Z304 686 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms