RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 JUPP14923 745 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 UGT2B7P16662 529 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 TYRP1P17643 537 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 PSMB5P28074 263 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 PRDX3P30048 256 aaKnown RBP10.35□□□□□ -0.75
SS18-213ENST00000579640 HMOX2P30519 316 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 CCR8P51685 355 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 DAB2P98082 770 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 DOC2AQ14183 400 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 HIST2H2ACQ16777 129 aaPredicted RBP10.35□□□□□ -0.75
SS18-213ENST00000579640 AASDHQ4L235 1098 aaPredicted RBP10.35□□□□□ -0.75
SS18-213ENST00000579640 C10orf62Q5T681 223 aaPredicted RBP10.35□□□□□ -0.75
SS18-213ENST00000579640 KANK2Q63ZY3 851 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 HIST2H2AA3Q6FI13 130 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 LETMD1Q6P1Q0 360 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 SPESP1Q6UW49 350 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 PRR23CQ6ZRP0 262 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 FLVCR1-AS1Q8TAF5 88 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 METTL6Q8TCB7 284 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 RSC1A1Q92681 617 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 REPS1Q96D71 796 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 AHCYL2Q96HN2 611 aaKnown RBP10.35□□□□□ -0.75
SS18-213ENST00000579640 CDK15Q96Q40 435 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 OR2A14Q96R47 310 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 CCT7Q99832 543 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 TRIM55Q9BYV6 548 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 SHCBP1LQ9BZQ2 653 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 PFDN4Q9NQP4 134 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 TMEM184CQ9NVA4 438 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 PNPOQ9NVS9 261 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 EPHA6Q9UF33 1036 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 POMT2Q9UKY4 750 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 SNX7Q9UNH6 387 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 U3KQA8 63 aa10.35□□□□□ -0.75
SS18-213ENST00000579640 IGHV1OR21-1A0A087WYE8 117 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 A0A0J9YY10 115 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 A0A1B0GTL3 188 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 LDOC1O95751 146 aaPredicted RBP10.34□□□□□ -0.75
SS18-213ENST00000579640 KRT6AP02538 564 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 KRT6BP04259 564 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 CAPN1P07384 714 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 CDH1P12830 882 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 DRD4P21917 467 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 ALDH4A1P30038 563 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 KRT6CP48668 564 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 CBX1P83916 185 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 ZNF33BQ06732 778 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 CLPPQ16740 277 aaPredicted RBP10.34□□□□□ -0.75
SS18-213ENST00000579640 CATSPEREQ5SY80 951 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 RNF165Q6ZSG1 346 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 MYLK4Q86YV6 388 aaPredicted RBP10.34□□□□□ -0.75
SS18-213ENST00000579640 CARFQ8N187 725 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 KRT78Q8N1N4 520 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 TBC1D19Q8N5T2 526 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 CDYL2Q8N8U2 506 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 OR4K1Q8NGD4 311 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 CCDC74AQ96AQ1 378 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 ZDHHC12Q96GR4 267 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 CD180Q99467 661 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 AIF1LQ9BQI0 150 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 NT5DC2Q9H857 520 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 PARD6AQ9NPB6 346 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 MARCOQ9UEW3 520 aaPredicted RBP10.34□□□□□ -0.75
SS18-213ENST00000579640 SNX6Q9UNH7 406 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 SH2B3Q9UQQ2 575 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 RNF11Q9Y3C5 154 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 KLK4Q9Y5K2 254 aa10.34□□□□□ -0.75
SS18-213ENST00000579640 KCNE1BA0A087WTH5 132 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 CPED1A4D0V7 1026 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 TRPC5OSA6NMA1 111 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 H0YIV9 168 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 HDAC3O15379 428 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 TNFSF14O43557 240 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 PRAMEF4O60810 478 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 FAM107AO95990 144 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 KITP10721 976 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 CD59P13987 128 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 ALOX15P16050 662 aaPredicted RBP10.33□□□□□ -0.76
SS18-213ENST00000579640 TGM1P22735 817 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 GRK3P35626 688 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 PPM1FP49593 454 aaPredicted RBP10.33□□□□□ -0.76
SS18-213ENST00000579640 OR1D5P58170 312 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 SQSTM1Q13501 440 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 PRAMEF9Q5VWM5 478 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 KIAA1614Q5VZ46 1190 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 GUSBP11Q6P575 273 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 SPRED1Q7Z699 444 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 FAM129CQ86XR2 697 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 PLXDC1Q8IUK5 500 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 DCBLD1Q8N8Z6 715 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 AGR3Q8TD06 166 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 RHBDD1Q8TEB9 315 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 STON2Q8WXE9 905 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 ZUFSPQ96AP4 578 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 CNDP2Q96KP4 475 aaKnown RBP10.33□□□□□ -0.76
SS18-213ENST00000579640 DPYSL5Q9BPU6 564 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 ABCG4Q9H172 646 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 TNFRSF12AQ9NP84 129 aa10.33□□□□□ -0.76
SS18-213ENST00000579640 CUEDC1Q9NWM3 386 aaPredicted RBP10.33□□□□□ -0.76
SS18-213ENST00000579640 GEMIN8Q9NWZ8 242 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms