RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 ZNF71Q9NQZ8 489 aaPredicted RBP9.87□□□□□ -0.83
SS18-210ENST00000578700 UTP6Q9NYH9 597 aaKnown RBP9.87□□□□□ -0.83
SS18-210ENST00000578700 TSR3Q9UJK0 312 aaKnown RBP9.87□□□□□ -0.83
SS18-210ENST00000578700 SLC12A4Q9UP95 1085 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 OARD1Q9Y530 152 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 CFAP73A6NFT4 308 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 INPP4BO15327 924 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 SLC16A5O15375 505 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 VEGFDO43915 354 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 CDK14O94921 469 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 ANXA5P08758 320 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 ESRRAP11474 423 aaPredicted RBP9.86□□□□□ -0.83
SS18-210ENST00000578700 NCF2P19878 526 aaPredicted RBP9.86□□□□□ -0.83
SS18-210ENST00000578700 MAP4P27816 1152 aaKnown RBP9.86□□□□□ -0.83
SS18-210ENST00000578700 AOAHP28039 575 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 ALDH4A1P30038 563 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 CCR7P32248 378 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 ARL1P40616 181 aaPredicted RBP9.86□□□□□ -0.83
SS18-210ENST00000578700 SCTRP47872 440 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 PPM1FP49593 454 aaPredicted RBP9.86□□□□□ -0.83
SS18-210ENST00000578700 POLE2P56282 527 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 OR1D5P58170 312 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 PLOD1Q02809 727 aaPredicted RBP9.86□□□□□ -0.83
SS18-210ENST00000578700 ACTN3Q08043 901 aaPredicted RBP9.86□□□□□ -0.83
SS18-210ENST00000578700 TMEM115Q12893 351 aaPredicted RBP9.86□□□□□ -0.83
SS18-210ENST00000578700 BNIP1Q12981 228 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 KCNAB2Q13303 367 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 BIRC2Q13490 618 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 KRT72Q14CN4 511 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 C16orf72Q14CZ0 275 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 TGFBIQ15582 683 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 RBBP7Q16576 425 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 GALNTL6Q49A17 601 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 C4orf17Q53FE4 359 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 CDKL4Q5MAI5 379 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 NXNQ6DKJ4 435 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 SULT1C3Q6IMI6 304 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 METTL2BQ6P1Q9 378 aaKnown RBP9.86□□□□□ -0.83
SS18-210ENST00000578700 TTC23LQ6PF05 361 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 NEK10Q6ZWH5 1172 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 SPRED1Q7Z699 444 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 DTX1Q86Y01 620 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 RP1L1Q8IWN7 2480 aaPredicted RBP9.86□□□□□ -0.83
SS18-210ENST00000578700 CLYBLQ8N0X4 340 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 TCAIMQ8N3R3 496 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 CCL4L1Q8NHW4 92 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 MCOLN3Q8TDD5 553 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 ATP6V1E2Q96A05 226 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 PDXPQ96GD0 296 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 NSL1Q96IY1 281 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 WDR92Q96MX6 357 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 CCM2Q9BSQ5 444 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 HGH1Q9BTY7 390 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 CCDC28BQ9BUN5 200 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 SLC12A9Q9BXP2 914 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 SHCBP1LQ9BZQ2 653 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 TMEM168Q9H0V1 697 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 GSTO2Q9H4Y5 243 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.86□□□□□ -0.83
SS18-210ENST00000578700 WWOXQ9NZC7 414 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 UNC79Q9P2D8 2635 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 TRAF6Q9Y4K3 522 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 ITPR2Q14571 2701 aa9.86□□□□□ -0.83
SS18-210ENST00000578700 SDK2Q58EX2 2172 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 TMEM202A6NGA9 273 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 OR2AG2A6NM03 316 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 RHPN2P1A8MT19 583 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 FADS2P1A8MWK0 482 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 STMND1H3BQB6 276 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 B4GAT1O43505 415 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 KLK8O60259 260 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 NUAK1O60285 661 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 GPC4O75487 556 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 UNC5CO95185 931 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 MTHFD2P13995 350 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 CALB2P22676 271 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 CD82P27701 267 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 CCR10P46092 362 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 KCNC1P48547 511 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 PRLHRP49683 370 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 PKNOX1P55347 436 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 MAZP56270 477 aaKnown RBP9.85□□□□□ -0.83
SS18-210ENST00000578700 B4GALNT1Q00973 533 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 CLCQ05315 142 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 CDC16Q13042 620 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 PDCD2Q16342 344 aaPredicted RBP9.85□□□□□ -0.83
SS18-210ENST00000578700 C14orf28Q4W4Y0 310 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 UNC50Q53HI1 259 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 ACSBG2Q5FVE4 666 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 FAM91A1Q658Y4 838 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 HIST2H2BCQ6DN03 193 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 TMEM220Q6QAJ8 160 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 ADAMTSL4Q6UY14 1074 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 UBE2R2Q712K3 238 aaPredicted RBP9.85□□□□□ -0.83
SS18-210ENST00000578700 SLITRK4Q8IW52 837 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 PLA2G15Q8NCC3 412 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 CEP70Q8NHQ1 597 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 LKAAEAR1Q8TD35 194 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 TRPC4APQ8TEL6 797 aa9.85□□□□□ -0.83
SS18-210ENST00000578700 OR1E3Q8WZA6 343 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms