RNA–Protein interactions for RNA: ENST00000578412.1

TOP2A-204, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-204ENST00000578412 CDT1Q9H211 546 aa3.85□□□□□ -1.79
TOP2A-204ENST00000578412 STN1Q9H668 368 aaKnown RBP3.85□□□□□ -1.79
TOP2A-204ENST00000578412 ZDHHC4Q9NPG8 344 aa3.85□□□□□ -1.79
TOP2A-204ENST00000578412 CCDC177Q9NQR7 707 aaPredicted RBP3.85□□□□□ -1.79
TOP2A-204ENST00000578412 BEX4Q9NWD9 120 aaPredicted RBP3.85□□□□□ -1.79
TOP2A-204ENST00000578412 SLC25A10Q9UBX3 287 aaPredicted RBP3.85□□□□□ -1.79
TOP2A-204ENST00000578412 LSM7Q9UK45 103 aaKnown RBP3.85□□□□□ -1.79
TOP2A-204ENST00000578412 ACAD8Q9UKU7 415 aa3.85□□□□□ -1.79
TOP2A-204ENST00000578412 RAB21Q9UL25 225 aa3.85□□□□□ -1.79
TOP2A-204ENST00000578412 PLA2G4CQ9UP65 541 aa3.85□□□□□ -1.79
TOP2A-204ENST00000578412 SATB2Q9UPW6 733 aa3.85□□□□□ -1.79
TOP2A-204ENST00000578412 SNX5Q9Y5X3 404 aa3.85□□□□□ -1.79
TOP2A-204ENST00000578412 CPQQ9Y646 472 aa3.85□□□□□ -1.79
TOP2A-204ENST00000578412 BOD1L1Q8NFC6 3051 aa3.85□□□□□ -1.79
TOP2A-204ENST00000578412 CITO14578 2027 aa3.85□□□□□ -1.79
TOP2A-204ENST00000578412 ANK1P16157 1881 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 TBC1D3DA0A087WVF3 549 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 TBC1D3IA0A087WXS9 549 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 TBC1D3EA0A087X179 549 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 TBC1D3KA0A087X1G2 549 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 CXorf65A6NEN9 183 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 TBC1D3FA6NER0 549 aaPredicted RBP3.84□□□□□ -1.79
TOP2A-204ENST00000578412 GAGE10A6NGK3 116 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 NPIPB15A6NHN6 443 aaPredicted RBP3.84□□□□□ -1.79
TOP2A-204ENST00000578412 MBD3L5A6NJ08 208 aaPredicted RBP3.84□□□□□ -1.79
TOP2A-204ENST00000578412 C3orf70A6NLC5 250 aaPredicted RBP3.84□□□□□ -1.79
TOP2A-204ENST00000578412 SMTNL1A8MU46 457 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 CDRT15L2A8MXV6 281 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 TBC1D3LB9A6J9 549 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 H0YCG3 227 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 TLR4O00206 839 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 CACNG3O60359 315 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 CCNT1O60563 726 aaKnown RBP3.84□□□□□ -1.79
TOP2A-204ENST00000578412 HUS1O60921 280 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 ALDOCP09972 364 aaKnown RBP3.84□□□□□ -1.79
TOP2A-204ENST00000578412 TBC1D3HP0C7X1 549 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 LIPCP11150 499 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 ABCD1P33897 745 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 DCTP40126 519 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 LHX1P48742 406 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 TAF6P49848 677 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 CDH15P55291 814 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 RPL15P61313 204 aaKnown RBP3.84□□□□□ -1.79
TOP2A-204ENST00000578412 KLRB1Q12918 225 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 CFAP221Q4G0U5 840 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 ZC2HC1CQ53FD0 456 aaPredicted RBP3.84□□□□□ -1.79
TOP2A-204ENST00000578412 ZNF324BQ6AW86 544 aaPredicted RBP3.84□□□□□ -1.79
TOP2A-204ENST00000578412 TBC1D3GQ6DHY5 549 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 HIST2H2BCQ6DN03 193 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 TBC1D3CQ6IPX1 549 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 TMEM88Q6PEY1 159 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 DENND5BQ6ZUT9 1274 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 TIPARPQ7Z3E1 657 aaKnown RBP3.84□□□□□ -1.79
TOP2A-204ENST00000578412 IQCHQ86VS3 1027 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 GPSM1Q86YR5 675 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 TBC1D3Q8IZP1 549 aaPredicted RBP3.84□□□□□ -1.79
TOP2A-204ENST00000578412 TMEM86AQ8N2M4 240 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 PTGR2Q8N8N7 351 aaPredicted RBP3.84□□□□□ -1.79
TOP2A-204ENST00000578412 OR52N4Q8NGI2 321 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 OR10T2Q8NGX3 314 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 OR2T3Q8NH03 318 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 C9orf43Q8TAL5 461 aaPredicted RBP3.84□□□□□ -1.79
TOP2A-204ENST00000578412 SLC2A12Q8TD20 617 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 NUDCD2Q8WVJ2 157 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 KAT2AQ92830 837 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 SAAL1Q96ER3 474 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 MED30Q96HR3 178 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 LMLNQ96KR4 655 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 ZNF560Q96MR9 790 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 NR1H4Q96RI1 486 aaPredicted RBP3.84□□□□□ -1.79
TOP2A-204ENST00000578412 SLC22A12Q96S37 553 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 CD180Q99467 661 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.84□□□□□ -1.79
TOP2A-204ENST00000578412 MAK16Q9BXY0 300 aaKnown RBP3.84□□□□□ -1.79
TOP2A-204ENST00000578412 EDEM3Q9BZQ6 932 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 STRADBQ9C0K7 418 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 ISCUQ9H1K1 167 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 LHX5Q9H2C1 402 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 C6orf106Q9H6K1 298 aaPredicted RBP3.84□□□□□ -1.79
TOP2A-204ENST00000578412 C17orf75Q9HAS0 396 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 GRPEL1Q9HAV7 217 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 TUFT1Q9NNX1 390 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 KCNMB3Q9NPA1 279 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 SPAG4Q9NPE6 437 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 SIRT3Q9NTG7 399 aaPredicted RBP3.84□□□□□ -1.79
TOP2A-204ENST00000578412 ABCF3Q9NUQ8 709 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 ALKBH4Q9NXW9 302 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 DONSONQ9NYP3 566 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 WRAP73Q9P2S5 460 aaPredicted RBP3.84□□□□□ -1.79
TOP2A-204ENST00000578412 THAP10Q9P2Z0 257 aaPredicted RBP3.84□□□□□ -1.79
TOP2A-204ENST00000578412 SUN2Q9UH99 717 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 SARDHQ9UL12 918 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 PCDHA7Q9UN72 937 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 ICKQ9UPZ9 632 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 MED13Q9UHV7 2174 aa3.84□□□□□ -1.79
TOP2A-204ENST00000578412 CELSR2Q9HCU4 2923 aa3.84□□□□□ -1.8
TOP2A-204ENST00000578412 SPG11Q96JI7 2443 aa3.83□□□□□ -1.8
TOP2A-204ENST00000578412 GOLGA6L10A0A0M3HER8 536 aa3.83□□□□□ -1.8
TOP2A-204ENST00000578412 KLF18A0A0U1RQI7 1052 aa3.83□□□□□ -1.8
TOP2A-204ENST00000578412 HEATR9A2RTY3 570 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms