RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 SFXN2Q96NB2 322 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 LRRC3BQ96PB8 259 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 SPAG5Q96R06 1193 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 SEPHS2Q99611 448 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 MAP3K3Q99759 626 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 SOSTQ9BQB4 213 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 TDRD1Q9BXT4 1180 aaKnown RBP1.97□□□□□ -2.09
TOP2A-202ENST00000577541 DGCR6LQ9BY27 220 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 PANK2Q9BZ23 570 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 FAM49AQ9H0Q0 323 aaPredicted RBP1.97□□□□□ -2.09
TOP2A-202ENST00000577541 TLE6Q9H808 572 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 CHST11Q9NPF2 352 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 SPHK2Q9NRA0 654 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 NSMCE4AQ9NXX6 385 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 MUTYHQ9UIF7 546 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 TNNQ9UQP3 1299 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 CSNK1G3Q9Y6M4 447 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 A0A1W2PPM1 405 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 TCRBV21S2A2A0A5A6 115 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 ANKRD18BA2A2Z9 1011 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 SRRM5B3KS81 715 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 BCL10O95999 233 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 IGHEP01854 428 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 PRB2P02812 416 aaPredicted RBP1.96□□□□□ -2.1
TOP2A-202ENST00000577541 PFKFB1P16118 471 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 SAT1P21673 171 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 PTPN3P26045 913 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 ACTN2P35609 894 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 OR3A2P47893 321 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 VAMP7P51809 220 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 LIMK1P53667 647 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 CDH13P55290 713 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 MS4A2Q01362 244 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 TRA2AQ13595 282 aaKnown RBP eCLIP1.96□□□□□ -2.1
TOP2A-202ENST00000577541 WTAPQ15007 396 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 E2F5Q15329 346 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 PHKG1Q16816 387 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 WDR78Q5VTH9 848 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 MFSD12Q6NUT3 480 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 MZT2BQ6NZ67 158 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 GDPGP1Q6ZNW5 385 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 NUP54Q7Z3B4 507 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 PCGF5Q86SE9 256 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 ZNF584Q8IVC4 421 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 CDK20Q8IZL9 346 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 NDUFAF2Q8N183 169 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 OR10Q1Q8NGQ4 319 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 CFAP61Q8NHU2 1237 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 ZNF486Q96H40 463 aaPredicted RBP1.96□□□□□ -2.1
TOP2A-202ENST00000577541 RSRC1Q96IZ7 334 aaKnown RBP1.96□□□□□ -2.1
TOP2A-202ENST00000577541 FAM218AQ96MZ4 157 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 LGMNQ99538 433 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 TMX4Q9H1E5 349 aaPredicted RBP1.96□□□□□ -2.1
TOP2A-202ENST00000577541 MTHFD2LQ9H903 347 aaPredicted RBP1.96□□□□□ -2.1
TOP2A-202ENST00000577541 MYNNQ9NPC7 610 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 HAUS2Q9NVX0 235 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 STK26Q9P289 416 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 C19orf25Q9UFG5 118 aaPredicted RBP1.96□□□□□ -2.1
TOP2A-202ENST00000577541 DDX25Q9UHL0 483 aaKnown RBP1.96□□□□□ -2.1
TOP2A-202ENST00000577541 FBXO2Q9UK22 296 aaPredicted RBP1.96□□□□□ -2.1
TOP2A-202ENST00000577541 PADI2Q9Y2J8 665 aa1.96□□□□□ -2.1
TOP2A-202ENST00000577541 IGHV4-30-2A0A087WSY4 118 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 A0A1W2PPK0 400 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 hCG_1807616A0A1W2PRN6 198 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 PI4K2BG5E9Z4 385 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 K7EQD1 137 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 FOLR2P14207 255 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 IRF2P14316 349 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 DARSP14868 501 aaKnown RBP1.95□□□□□ -2.1
TOP2A-202ENST00000577541 EPCAMP16422 314 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 CAPN2P17655 700 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 RPL35AP18077 110 aaKnown RBP1.95□□□□□ -2.1
TOP2A-202ENST00000577541 ITIH1P19827 911 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 ZFP36L2P47974 494 aaKnown RBP1.95□□□□□ -2.1
TOP2A-202ENST00000577541 LHX1P48742 406 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 ZNF75DP51815 510 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 PRELPP51888 382 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 MYL7Q01449 175 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 COX10Q12887 443 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 STK4Q13043 487 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 NPTX1Q15818 432 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 SNAPC1Q16533 368 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 SPATA1Q5VX52 437 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 C3P1Q6ZMU1 363 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 ARHGAP22Q7Z5H3 698 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 DNAAF5Q86Y56 855 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 C17orf53Q8N3J3 647 aaPredicted RBP1.95□□□□□ -2.1
TOP2A-202ENST00000577541 AQP11Q8NBQ7 271 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 C11orf45Q8TAV5 145 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 MOB3AQ96BX8 217 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 ZNF830Q96NB3 372 aaPredicted RBP1.95□□□□□ -2.1
TOP2A-202ENST00000577541 NECTIN4Q96NY8 510 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 RPP25Q9BUL9 199 aaKnown RBP1.95□□□□□ -2.1
TOP2A-202ENST00000577541 GPR88Q9GZN0 384 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 ZMYND12Q9H0C1 365 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 TUBB1Q9H4B7 451 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 PDE7BQ9NP56 450 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 PIH1D3Q9NQM4 214 aaKnown RBP1.95□□□□□ -2.1
TOP2A-202ENST00000577541 OLAHQ9NV23 265 aa1.95□□□□□ -2.1
TOP2A-202ENST00000577541 ANAPC2Q9UJX6 822 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms