RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 UMPSP11172 480 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 NR4A1P22736 598 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 MYF6P23409 242 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 HRH2P25021 359 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 HTR1EP28566 365 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 IGFALSP35858 605 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 GNPDA1P46926 289 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 ALDH3B2P48448 385 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 CLCN4P51793 760 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 TUBA4AP68366 448 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 HPCAP84074 193 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 EMX2Q04743 252 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 GTF2H3Q13889 308 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 BOP1Q14137 746 aaKnown RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 KCTD21Q4G0X4 260 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 SLC44A4Q53GD3 710 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 COQ5Q5HYK3 327 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 CERS6Q6ZMG9 384 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 DNAJB7Q7Z6W7 309 aaPredicted RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 ERI1Q8IV48 349 aaKnown RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 HS3ST5Q8IZT8 346 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 APCDD1Q8J025 514 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 WFDC5Q8TCV5 224 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 POF1BQ8WVV4 589 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 SELENOMQ8WWX9 145 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 PYCR2Q96C36 320 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 FAM120BQ96EK7 910 aaKnown RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 CCDC74BQ96LY2 380 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 MUS81Q96NY9 551 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 OR52E6Q96RD3 313 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 PAIP1Q9H074 479 aaKnown RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 MUC13Q9H3R2 512 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 VAPAQ9P0L0 249 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 IFT80Q9P2H3 777 aaPredicted RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 FBXO10Q9UK96 956 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 PRSS21Q9Y6M0 314 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 MYO16Q9Y6X6 1858 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 A0A1W2PPW3 197 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 OR7A17O14581 309 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 HS6ST1O60243 411 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 ZNF682O95780 498 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 JMJD7P0C870 316 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 THRBP10828 461 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 CDH1P12830 882 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 GJA1P17302 382 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 PRKACGP22612 351 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 HOXD10P28358 340 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 ENTPD1P49961 510 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 CLCN7P51798 805 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 NUP107P57740 925 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 GRIK2Q13002 908 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 TTLL9Q3SXZ7 439 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 SLC36A3Q495N2 470 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 ZBED5Q49AG3 693 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 PYCR3Q53H96 274 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 SBSNQ6UWP8 590 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 CHST9Q7L1S5 443 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 TMCO2Q7Z6W1 182 aaPredicted RBP5.21□□□□□ -1.57
VAPA-203ENST00000577539 PATL1Q86TB9 770 aaKnown RBP5.21□□□□□ -1.57
VAPA-203ENST00000577539 TSPAN33Q86UF1 283 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 ADGRG2Q8IZP9 1017 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 ZBTB2Q8N680 514 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 KCT2Q8NC54 265 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 HJURPQ8NCD3 748 aaPredicted RBP5.21□□□□□ -1.57
VAPA-203ENST00000577539 FAM81AQ8TBF8 368 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 ISOC1Q96CN7 298 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 SMOC1Q9H4F8 434 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 ELOVL6Q9H5J4 265 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 LRTM1Q9HBL6 345 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 TLR9Q9NR96 1032 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 EXD2Q9NVH0 621 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 LHX3Q9UBR4 397 aa5.21□□□□□ -1.57
VAPA-203ENST00000577539 MYO1GB0I1T2 1018 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 TMX2-CTNND1H3BSU7 103 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 DLGAP1O14490 977 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 ACOX3O15254 700 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 STK16O75716 305 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 PGLSO95336 258 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 BMP10O95393 424 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 KRT6AP02538 564 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 KRT6BP04259 564 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 HIST1H2AGP0C0S8 130 aaPredicted RBP5.21□□□□□ -1.58
VAPA-203ENST00000577539 PRR35P0CG20 571 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 IL7RP16871 459 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 HMGA1P17096 107 aaKnown RBP5.21□□□□□ -1.58
VAPA-203ENST00000577539 HIST1H2ADP20671 130 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 CA5AP35218 305 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 HMGCLP35914 325 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 KRT6CP48668 564 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 ARSFP54793 590 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 NAA20P61599 178 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 CYP4F8P98187 520 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 PMS2P3Q13401 168 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 DAG1Q14118 895 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 BORAQ6PGQ7 559 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 ENPP6Q6UWR7 440 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.21□□□□□ -1.58
VAPA-203ENST00000577539 FAM86B1Q8N7N1 296 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 ZNF555Q8NEP9 628 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 BPIFB6Q8NFQ5 453 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms