RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 FAM159BA6NKW6 160 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 C21orf140B9A014 251 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 TERTO14746 1132 aaKnown RBP12.71□□□□□ -0.37
RPAIN-216ENST00000575599 ATXN7O15265 892 aaPredicted RBP12.71□□□□□ -0.37
RPAIN-216ENST00000575599 SLC16A5O15375 505 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 CTSVO60911 334 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 CCNDBP1O95273 360 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 INHBAP08476 426 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 HBQ1P09105 142 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 HIST1H2AGP0C0S8 130 aaPredicted RBP12.71□□□□□ -0.37
RPAIN-216ENST00000575599 HIST1H2ADP20671 130 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 GP5P40197 560 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 MSH2P43246 934 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 RPS18P62269 152 aaKnown RBP12.71□□□□□ -0.37
RPAIN-216ENST00000575599 TBPL1P62380 186 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 CDC20Q12834 499 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 NAB1Q13506 487 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 ERV3-1Q14264 604 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 EFTUD2Q15029 972 aaKnown RBP eCLIP12.71□□□□□ -0.37
RPAIN-216ENST00000575599 KBTBD12Q3ZCT8 623 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 C1orf189Q5VU69 101 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 ICE2Q659A1 982 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 LCN10Q6JVE6 187 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 TLDC1Q6P9B6 456 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 TMEM207Q6UWW9 146 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 ADCK2Q7Z695 626 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 CEP97Q8IW35 865 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 PPM1NQ8N819 430 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 ZUFSPQ96AP4 578 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 ALKBH8Q96BT7 664 aaKnown RBP12.71□□□□□ -0.37
RPAIN-216ENST00000575599 MRRFQ96E11 262 aaKnown RBP12.71□□□□□ -0.37
RPAIN-216ENST00000575599 MED8Q96G25 268 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 HIST1H2AHQ96KK5 128 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 CCDC138Q96M89 665 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 ZIM3Q96PE6 472 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 RBBP8Q99708 897 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 HIST1H2AJQ99878 128 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 SELENOSQ9BQE4 189 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 ARHGAP9Q9BRR9 750 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 MCMBPQ9BTE3 642 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 H2AFJQ9BTM1 129 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 NDC1Q9BTX1 674 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 ACTL8Q9H568 366 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 ACSS3Q9H6R3 686 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 CAB39LQ9H9S4 337 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 PPCSQ9HAB8 311 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 CCDC177Q9NQR7 707 aaPredicted RBP12.71□□□□□ -0.37
RPAIN-216ENST00000575599 STARD5Q9NSY2 213 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 TXLNGQ9NUQ3 528 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 DHCR7Q9UBM7 475 aaKnown RBP12.71□□□□□ -0.37
RPAIN-216ENST00000575599 AP1M2Q9Y6Q5 423 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 NBEAQ8NFP9 2946 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 MGAQ8IWI9 3026 aa12.71□□□□□ -0.38
RPAIN-216ENST00000575599 NPEPPSL1A6NEC2 478 aa12.7□□□□□ -0.38
RPAIN-216ENST00000575599 SMIM23A6NLE4 172 aa12.7□□□□□ -0.38
RPAIN-216ENST00000575599 EIF4E1BA6NMX2 242 aaKnown RBP12.7□□□□□ -0.38
RPAIN-216ENST00000575599 TARM1B6A8C7 271 aa12.7□□□□□ -0.38
RPAIN-216ENST00000575599 H3BMH7 237 aa12.7□□□□□ -0.38
RPAIN-216ENST00000575599 AGXTP21549 392 aa12.7□□□□□ -0.38
RPAIN-216ENST00000575599 VSX2P58304 361 aaPredicted RBP12.7□□□□□ -0.38
RPAIN-216ENST00000575599 RPS15P62841 145 aaKnown RBP12.7□□□□□ -0.38
RPAIN-216ENST00000575599 MC1RQ01726 317 aa12.7□□□□□ -0.38
RPAIN-216ENST00000575599 NAA25Q14CX7 972 aa12.7□□□□□ -0.38
RPAIN-216ENST00000575599 KRT71Q3SY84 523 aa12.7□□□□□ -0.38
RPAIN-216ENST00000575599 CEP85LQ5SZL2 805 aa12.7□□□□□ -0.38
RPAIN-216ENST00000575599 PRAMEF13Q5VWM6 474 aa12.7□□□□□ -0.38
RPAIN-216ENST00000575599 PCSK4Q6UW60 755 aa12.7□□□□□ -0.38
RPAIN-216ENST00000575599 CYS1Q717R9 158 aa12.7□□□□□ -0.38
RPAIN-216ENST00000575599 TAOK1Q7L7X3 1001 aa12.7□□□□□ -0.38
RPAIN-216ENST00000575599 LRRC56Q8IYG6 542 aaPredicted RBP12.7□□□□□ -0.38
RPAIN-216ENST00000575599 OR2W6PQ8NHA6 318 aa12.7□□□□□ -0.38
RPAIN-216ENST00000575599 TRIM54Q9BYV2 358 aa12.7□□□□□ -0.38
RPAIN-216ENST00000575599 ROPN1BQ9BZX4 212 aaPredicted RBP12.7□□□□□ -0.38
RPAIN-216ENST00000575599 ATG10Q9H0Y0 220 aa12.7□□□□□ -0.38
RPAIN-216ENST00000575599 EPB41L4BQ9H329 900 aa12.7□□□□□ -0.38
RPAIN-216ENST00000575599 CENPHQ9H3R5 247 aa12.7□□□□□ -0.38
RPAIN-216ENST00000575599 ROPN1Q9HAT0 212 aaPredicted RBP12.7□□□□□ -0.38
RPAIN-216ENST00000575599 GPAMQ9HCL2 828 aa12.7□□□□□ -0.38
RPAIN-216ENST00000575599 ARL15Q9NXU5 204 aa12.7□□□□□ -0.38
RPAIN-216ENST00000575599 UTP6Q9NYH9 597 aaKnown RBP12.7□□□□□ -0.38
RPAIN-216ENST00000575599 IKZF3Q9UKT9 509 aa12.7□□□□□ -0.38
RPAIN-216ENST00000575599 SRPK3Q9UPE1 567 aa12.7□□□□□ -0.38
RPAIN-216ENST00000575599 MTO1Q9Y2Z2 717 aaKnown RBP12.7□□□□□ -0.38
RPAIN-216ENST00000575599 CHD6Q8TD26 2715 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 ANKRD12Q6UB98 2062 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 IGKV1-8A0A0C4DH67 115 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 CDC14CA4D256 554 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 OR2A25A4D2G3 310 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 C9J4A7 227 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 PHGDHO43175 533 aaKnown RBP12.69□□□□□ -0.38
RPAIN-216ENST00000575599 CREG1O75629 220 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 FAM155BO75949 473 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 GUCA1CO95843 209 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 C1QAP02745 245 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 SHBGP04278 402 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 ITGB2P05107 769 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 EIF2S1P05198 315 aaKnown RBP12.69□□□□□ -0.38
RPAIN-216ENST00000575599 MYZAPP0CAP1 466 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 PTPN4P29074 926 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 POU4F1Q01851 419 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms