RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 CHTF18Q8WVB6 975 aa9.46□□□□□ -0.9
CALCOCO2-227ENST00000575560 HDAC10Q969S8 669 aa9.46□□□□□ -0.9
CALCOCO2-227ENST00000575560 RAD51AP1Q96B01 352 aa9.46□□□□□ -0.9
CALCOCO2-227ENST00000575560 TTC1Q99614 292 aa9.46□□□□□ -0.9
CALCOCO2-227ENST00000575560 MIPEPQ99797 713 aa9.46□□□□□ -0.9
CALCOCO2-227ENST00000575560 ZFYVE21Q9BQ24 234 aa9.46□□□□□ -0.9
CALCOCO2-227ENST00000575560 TUBB6Q9BUF5 446 aa9.46□□□□□ -0.9
CALCOCO2-227ENST00000575560 OSBPL8Q9BZF1 889 aa9.46□□□□□ -0.9
CALCOCO2-227ENST00000575560 LRRC40Q9H9A6 602 aa9.46□□□□□ -0.9
CALCOCO2-227ENST00000575560 GPAMQ9HCL2 828 aa9.46□□□□□ -0.9
CALCOCO2-227ENST00000575560 MKKSQ9NPJ1 570 aaPredicted RBP9.46□□□□□ -0.9
CALCOCO2-227ENST00000575560 C14orf105Q9NVL8 296 aa9.46□□□□□ -0.9
CALCOCO2-227ENST00000575560 PIH1D1Q9NWS0 290 aaKnown RBP9.46□□□□□ -0.9
CALCOCO2-227ENST00000575560 TEKT2Q9UIF3 430 aa9.46□□□□□ -0.9
CALCOCO2-227ENST00000575560 PCDHA3Q9Y5H8 950 aa9.46□□□□□ -0.9
CALCOCO2-227ENST00000575560 CPAMD8Q8IZJ3 1885 aa9.46□□□□□ -0.9
CALCOCO2-227ENST00000575560 SPG11Q96JI7 2443 aa9.46□□□□□ -0.9
CALCOCO2-227ENST00000575560 DNHD1Q96M86 4753 aa9.46□□□□□ -0.9
CALCOCO2-227ENST00000575560 NAV3Q8IVL0 2385 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 MACROD2A1Z1Q3 448 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 ASPDHA6ND91 283 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 GOLGA6L19H0YKK7 550 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 ADAM10O14672 748 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 FFAR3O14843 346 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 GPR42O15529 346 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 PRPF4O43172 522 aaKnown RBP eCLIP9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 FOXS1O43638 330 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 ZNF189O75820 626 aaPredicted RBP9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 C1orf105O95561 183 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 GOT2P00505 430 aaKnown RBP9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 APOA4P06727 396 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 CD1EP15812 388 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 CTNNA2P26232 953 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 CTNNA1P35221 906 aaKnown RBP9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 CSNK1G2P78368 415 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 ACVR1Q04771 509 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 ZNF33BQ06732 778 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 SEMA3AQ14563 771 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 ACER2Q5QJU3 275 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 C11orf63Q6NUN7 778 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 TTC23LQ6PF05 361 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 ZNF534Q76KX8 674 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 MDS2Q8NDY4 140 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 MAGED4Q96JG8 741 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 CABS1Q96KC9 395 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 DPH7Q9BTV6 452 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 YIPF2Q9BWQ6 316 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 TSSK1BQ9BXA7 367 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 SYNPO2LQ9H987 977 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 SLC2A6Q9UGQ3 507 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 MKL2Q9ULH7 1088 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 RIMKLBQ9ULI2 386 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 TTC7AQ9ULT0 858 aaPredicted RBP9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 RUVBL1Q9Y265 456 aaKnown RBP9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 NEU2Q9Y3R4 380 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 NFS1Q9Y697 457 aa9.45□□□□□ -0.9
CALCOCO2-227ENST00000575560 CACNA1CQ13936 2221 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 KRT87PA6NCN2 255 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 RCCD1A6NED2 376 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 A8MUI8 341 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 TTI1O43156 1089 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 PSMD3O43242 534 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 DIAPH2O60879 1101 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 MFAP3LO75121 409 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 MLYCDO95822 493 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 TPM3P06753 285 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 UQCRHP07919 91 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 ERVK-10P10266 1014 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 CD96P40200 585 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 TUBA3CQ13748 450 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 FASTKQ14296 549 aaKnown RBP9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 SYT16Q17RD7 645 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 HKDC1Q2TB90 917 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 GARNL3Q5VVW2 1013 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 PLAG1Q6DJT9 500 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 LRRC8BQ6P9F7 803 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 TUBA3EQ6PEY2 450 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 AFTPHQ6ULP2 937 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 NCCRP1Q6ZVX7 275 aaPredicted RBP9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 DOLPP1Q86YN1 238 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 SIAH3Q8IW03 269 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 ZC3H7AQ8IWR0 971 aaKnown RBP9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 CHERPQ8IWX8 916 aaKnown RBP9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 KRT222Q8N1A0 295 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 FAM71DQ8N9W8 422 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 OR4L1Q8NH43 312 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 PHF10Q8WUB8 498 aaKnown RBP9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 MMABQ96EY8 250 aaPredicted RBP9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 SCMH1Q96GD3 660 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 ZNF354BQ96LW1 612 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 ZNF778Q96MU6 729 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 SIGLEC12Q96PQ1 595 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 OR2A5Q96R48 311 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 DMRTA2Q96SC8 542 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 CYTH2Q99418 400 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 PLCD4Q9BRC7 762 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 TRIM51Q9BSJ1 452 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 TMEM121Q9BTD3 319 aa9.44□□□□□ -0.9
CALCOCO2-227ENST00000575560 A0A0A6YYC8 382 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 IGKV1-8A0A0C4DH67 115 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms