RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 YBX1P67809 324 aaKnown RBP13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 SH3BP2P78314 561 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 GABREP78334 506 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 CDC16Q13042 620 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 KCNAB1Q14722 419 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 PDK4Q16654 411 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 ZC3H12BQ5HYM0 836 aaKnown RBP13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 TMEM164Q5U3C3 297 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 ERMP1Q7Z2K6 904 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 TMPRSS11BQ86T26 416 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 SLC22A9Q8IVM8 553 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 KLHDC8AQ8IYD2 350 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 ARMC2Q8NEN0 867 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 TCP10LQ8TDR4 215 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 PPP4R1Q8TF05 950 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 UBTD2Q8WUN7 234 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 CCDC126Q96EE4 140 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 PRAP1Q96NZ9 151 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 OR4K3Q96R72 315 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 OR6C1Q96RD1 312 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 POLR1BQ9H9Y6 1135 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 PRM3Q9NNZ6 103 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 SLC6A20Q9NP91 592 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 TMEM184CQ9NVA4 438 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 CUEDC1Q9NWM3 386 aaPredicted RBP13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 IRAK4Q9NWZ3 460 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 EMCNQ9ULC0 261 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 PLLPQ9Y342 182 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 NEUROG3Q9Y4Z2 214 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 ACTL7BQ9Y614 415 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 AK5Q9Y6K8 562 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 A0A0J9YVX5 310 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 A8MT66 165 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 B4E171 279 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 POLR1CO15160 346 aaPredicted RBP13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 DLX3O60479 287 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 H2AFYO75367 372 aaKnown RBP13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 SIX3O95343 332 aaPredicted RBP13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 SBK3P0C264 359 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 CPA3P15088 417 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 EPB42P16452 691 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 ITIH1P19827 911 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 EEF1DP29692 281 aaKnown RBP13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 ARL1P40616 181 aaPredicted RBP13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 TSPAN7P41732 249 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 PIK3CGP48736 1102 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 CCR8P51685 355 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 MC2RQ01718 297 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 TUBB3Q13509 450 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 PCBP2Q15366 365 aaKnown RBP eCLIP13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 GPR19Q15760 415 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 ZIC1Q15915 447 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 TNFAIP8L3Q5GJ75 292 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 AGBL2Q5U5Z8 902 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 FCRL6Q6DN72 434 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 TMEM151AQ8N4L1 468 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 TBC1D19Q8N5T2 526 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 TEX9Q8N6V9 391 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 RDH11Q8TC12 318 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 NEIL2Q969S2 332 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 ATP6V1E2Q96A05 226 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 PKNOX2Q96KN3 472 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 FAM111AQ96PZ2 611 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 PLCD4Q9BRC7 762 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 NRSN2Q9GZP1 204 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 C12orf65Q9H3J6 166 aaKnown RBP13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 FAM60AQ9NP50 221 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 SSU72Q9NP77 194 aaKnown RBP13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 FGF21Q9NSA1 209 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 GPRC5BQ9NZH0 403 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 RARRES3Q9UL19 164 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 SH2B3Q9UQQ2 575 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 MSRB2Q9Y3D2 182 aa13.94□□□□□ -0.18
NPLOC4-218ENST00000574964 SCN3AQ9NY46 2000 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 TRABD2BA6NFA1 517 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 TMEM150CB9EJG8 249 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 AGPSO00116 658 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 KATNA1O75449 491 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 TNFSF15O95150 251 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 FGF3P11487 239 aaPredicted RBP13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 FOLR1P15328 257 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 RAB15P59190 212 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 MAGOHP61326 146 aaKnown RBP13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 IRF8Q02556 426 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 GTF2H2Q13888 395 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 DEFB110Q30KQ9 67 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 CATSPEREQ5SY80 951 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 DCAF12Q5T6F0 453 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 GTF2H2CQ6P1K8 395 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 METTL2BQ6P1Q9 378 aaKnown RBP13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 CEACAM20Q6UY09 585 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 ZYG11AQ6WRX3 759 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 PAQR7Q86WK9 346 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 LSMEM2Q8N112 164 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 SREK1Q8WXA9 508 aaKnown RBP13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 NXPE2Q96DL1 559 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 TAAR9Q96RI9 348 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 AIF1LQ9BQI0 150 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 CHRNA10Q9GZZ6 450 aa13.93□□□□□ -0.18
NPLOC4-218ENST00000574964 PELI2Q9HAT8 420 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms