RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 LRRC49Q8IUZ0 686 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 KATNAL2Q8IYT4 538 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 TBC1D3Q8IZP1 549 aaPredicted RBP4.73□□□□□ -1.65
PRPF8-211ENST00000574728 SLC25A45Q8N413 288 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 FSTL5Q8N475 847 aaPredicted RBP4.73□□□□□ -1.65
PRPF8-211ENST00000574728 KCTD6Q8NC69 237 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 DEFB124Q8NES8 71 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 GANCQ8TET4 914 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 RAB7BQ96AH8 199 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 GRAMD1AQ96CP6 724 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 EID2BQ96D98 161 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 SERAC1Q96JX3 654 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 ZNF641Q96N77 438 aaPredicted RBP4.73□□□□□ -1.65
PRPF8-211ENST00000574728 NUDCD1Q96RS6 583 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 TRIB3Q96RU7 358 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 LGMNQ99538 433 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 ARPC5LQ9BPX5 153 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 DESI2Q9BSY9 194 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 GTPBP2Q9BX10 602 aaKnown RBP4.73□□□□□ -1.65
PRPF8-211ENST00000574728 SLC17A9Q9BYT1 436 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 GAREM1Q9H706 876 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 MBNL1Q9NR56 388 aaKnown RBP4.73□□□□□ -1.65
PRPF8-211ENST00000574728 NKX1-2Q9UD57 310 aaPredicted RBP4.73□□□□□ -1.65
PRPF8-211ENST00000574728 LCMT1Q9UIC8 334 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 RIMKLBQ9ULI2 386 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 HPCAL4Q9UM19 191 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 PPIL1Q9Y3C6 166 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 U3KQA8 63 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 CEP192Q8TEP8 1941 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 RALGAPA1Q6GYQ0 2036 aa4.73□□□□□ -1.65
PRPF8-211ENST00000574728 ATMQ13315 3056 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 ADAMTS9Q9P2N4 1935 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 KNTC1P50748 2209 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 A0A0U1RQS6 177 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 SPTY2D1-AS1A0A0U1RR47 76 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 SPAARA0A1B0GVQ0 90 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 LRRD1A4D1F6 860 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 KCNK1O00180 336 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 TRIM38O00635 465 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 PSTPIP1O43586 416 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 PMPCBO75439 489 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 TJP3O95049 919 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 PGLSO95336 258 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 PAK4O96013 591 aaPredicted RBP4.72□□□□□ -1.65
PRPF8-211ENST00000574728 SOD1P00441 154 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 VIPP01282 170 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 HLA-DQB2P05538 268 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 TPM1P09493 284 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 NPSP0C0P6 89 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 KRT10P13645 584 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 CEACAM1P13688 526 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 JUPP14923 745 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 CCNCP24863 283 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 CTNNA2P26232 953 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 CTNNA1P35221 906 aaKnown RBP4.72□□□□□ -1.65
PRPF8-211ENST00000574728 GJC1P36383 396 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 SLC1A1P43005 524 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 MMP13P45452 471 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 NOVA1P51513 510 aaKnown RBP4.72□□□□□ -1.65
PRPF8-211ENST00000574728 SUOXP51687 545 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 EEFSECP57772 596 aaKnown RBP4.72□□□□□ -1.65
PRPF8-211ENST00000574728 CCZ1BP86790 482 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 CCZ1P86791 482 aaPredicted RBP4.72□□□□□ -1.65
PRPF8-211ENST00000574728 SHC2P98077 582 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 E2F1Q01094 437 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 IL9RQ01113 521 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 OVGP1Q12889 678 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 KRT81Q14533 505 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 CNGA3Q16281 694 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 CYP1B1Q16678 543 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 HADHQ16836 314 aaKnown RBP4.72□□□□□ -1.65
PRPF8-211ENST00000574728 ST3GAL2Q16842 350 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 TBC1D25Q3MII6 688 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 SETMARQ53H47 684 aaPredicted RBP4.72□□□□□ -1.65
PRPF8-211ENST00000574728 KIAA1161Q6NSJ0 714 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 AADACL2Q6P093 401 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 BRAT1Q6PJG6 821 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 IL27RAQ6UWB1 636 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 RFLNAQ6ZTI6 216 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 BBS12Q6ZW61 710 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 Q6ZWC4 215 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 DPPA4Q7L190 304 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 TECPR1Q7Z6L1 1165 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 NT5DC3Q86UY8 548 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 GATAD2AQ86YP4 633 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 NAXDQ8IW45 347 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 KLHDC8BQ8IXV7 354 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 ATPAF2Q8N5M1 289 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 SIRT6Q8N6T7 355 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 C11orf44Q8N8P7 122 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 SPC24Q8NBT2 197 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 DENND6BQ8NEG7 585 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 ABHD11Q8NFV4 315 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 EXD1Q8NHP7 514 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 HDAC11Q96DB2 347 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 PPP1R16AQ96I34 528 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 FEM1CQ96JP0 617 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 CCDC114Q96M63 670 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 WDR24Q96S15 920 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 BAG1Q99933 345 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms