RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 HRASLS2Q9NWW9 162 aa23.17■■□□□ 1.3
ATPAF1-213ENST00000574428 ACTR10Q9NZ32 417 aa23.17■■□□□ 1.3
ATPAF1-213ENST00000574428 LILRA5A6NI73 299 aa23.16■■□□□ 1.3
ATPAF1-213ENST00000574428 PCDHGA12O60330 932 aa23.16■■□□□ 1.3
ATPAF1-213ENST00000574428 UGDHO60701 494 aa23.16■■□□□ 1.3
ATPAF1-213ENST00000574428 UBXN7O94888 489 aa23.16■■□□□ 1.3
ATPAF1-213ENST00000574428 C1GALT1C1LP0DN25 315 aa23.16■■□□□ 1.3
ATPAF1-213ENST00000574428 HTR6P50406 440 aa23.16■■□□□ 1.3
ATPAF1-213ENST00000574428 BTKQ06187 659 aa23.16■■□□□ 1.3
ATPAF1-213ENST00000574428 PRDX1Q06830 199 aaKnown RBP23.16■■□□□ 1.3
ATPAF1-213ENST00000574428 KIR2DS3Q14952 304 aa23.16■■□□□ 1.3
ATPAF1-213ENST00000574428 GGTA1PQ4G0N0 100 aa23.16■■□□□ 1.3
ATPAF1-213ENST00000574428 LIPJQ5W064 366 aa23.16■■□□□ 1.3
ATPAF1-213ENST00000574428 ATG9BQ674R7 924 aa23.16■■□□□ 1.3
ATPAF1-213ENST00000574428 OR2L3Q8NG85 312 aa23.16■■□□□ 1.3
ATPAF1-213ENST00000574428 FLVCR1-AS1Q8TAF5 88 aa23.16■■□□□ 1.3
ATPAF1-213ENST00000574428 C10orf82Q8WW14 230 aa23.16■■□□□ 1.3
ATPAF1-213ENST00000574428 APOLD1Q96LR9 279 aa23.16■■□□□ 1.3
ATPAF1-213ENST00000574428 EBF4Q9BQW3 602 aa23.16■■□□□ 1.3
ATPAF1-213ENST00000574428 TMEM120AQ9BXJ8 343 aa23.16■■□□□ 1.3
ATPAF1-213ENST00000574428 TUBB1Q9H4B7 451 aa23.16■■□□□ 1.3
ATPAF1-213ENST00000574428 OR5K3A6NET4 321 aa23.15■■□□□ 1.3
ATPAF1-213ENST00000574428 NUDT21O43809 227 aaKnown RBP23.15■■□□□ 1.3
ATPAF1-213ENST00000574428 JUPP14923 745 aa23.15■■□□□ 1.3
ATPAF1-213ENST00000574428 UGT2B7P16662 529 aa23.15■■□□□ 1.3
ATPAF1-213ENST00000574428 CASP2P42575 452 aa23.15■■□□□ 1.3
ATPAF1-213ENST00000574428 TBCCQ15814 346 aa23.15■■□□□ 1.3
ATPAF1-213ENST00000574428 GRHL2Q6ISB3 625 aa23.15■■□□□ 1.3
ATPAF1-213ENST00000574428 SCIMPQ6UWF3 145 aa23.15■■□□□ 1.3
ATPAF1-213ENST00000574428 ZNF438Q7Z4V0 828 aa23.15■■□□□ 1.3
ATPAF1-213ENST00000574428 OOSP2Q86WS3 158 aa23.15■■□□□ 1.3
ATPAF1-213ENST00000574428 WDR34Q96EX3 536 aa23.15■■□□□ 1.3
ATPAF1-213ENST00000574428 PTCD3Q96EY7 689 aaKnown RBP23.15■■□□□ 1.3
ATPAF1-213ENST00000574428 OR2A14Q96R47 310 aa23.15■■□□□ 1.3
ATPAF1-213ENST00000574428 SLC29A3Q9BZD2 475 aa23.15■■□□□ 1.3
ATPAF1-213ENST00000574428 SPNS1Q9H2V7 528 aa23.15■■□□□ 1.3
ATPAF1-213ENST00000574428 MRPS30Q9NP92 439 aaKnown RBP23.15■■□□□ 1.3
ATPAF1-213ENST00000574428 PADI4Q9UM07 663 aa23.15■■□□□ 1.3
ATPAF1-213ENST00000574428 IGKV1-8A0A0C4DH67 115 aa23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 H7BY64 318 aa23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 PIP5K1BO14986 540 aa23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 DIAPH2O60879 1101 aa23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 ZNF806P0C7X5 589 aa23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 GLB1P16278 677 aa23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 PPP1CAP62136 330 aa23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 SLBPQ14493 270 aaKnown RBP eCLIP23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 ZRSR2Q15696 482 aaKnown RBP23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 SLC9B1Q4ZJI4 515 aa23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 SGO1Q5FBB7 561 aa23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 KIAA1614Q5VZ46 1190 aa23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 TRIM73Q86UV7 250 aa23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 DDIASQ8IXT1 998 aa23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 SLC22A18Q96BI1 424 aa23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 PRAP1Q96NZ9 151 aa23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 HBEGFQ99075 208 aa23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 SIKE1Q9BRV8 207 aa23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 EHD1Q9H4M9 534 aa23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 SLC6A20Q9NP91 592 aa23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 FARSBQ9NSD9 589 aaKnown RBP23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 GEMIN8Q9NWZ8 242 aaKnown RBP23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 KCNK4Q9NYG8 393 aa23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 KLHL20Q9Y2M5 609 aa23.14■■□□□ 1.3
ATPAF1-213ENST00000574428 PCM1Q15154 2024 aa23.14■■□□□ 1.29
ATPAF1-213ENST00000574428 ARID1BQ8NFD5 2236 aaPredicted RBP23.14■■□□□ 1.29
ATPAF1-213ENST00000574428 C2orf74A8MZ97 194 aa23.14■■□□□ 1.29
ATPAF1-213ENST00000574428 CHEK2O96017 543 aa23.14■■□□□ 1.29
ATPAF1-213ENST00000574428 AMD1P17707 334 aa23.14■■□□□ 1.29
ATPAF1-213ENST00000574428 ALDH4A1P30038 563 aa23.14■■□□□ 1.29
ATPAF1-213ENST00000574428 IDH3AP50213 366 aa23.14■■□□□ 1.29
ATPAF1-213ENST00000574428 ARFIP2P53365 341 aa23.14■■□□□ 1.29
ATPAF1-213ENST00000574428 SPEM2Q0P670 501 aa23.14■■□□□ 1.29
ATPAF1-213ENST00000574428 E2F2Q14209 437 aa23.14■■□□□ 1.29
ATPAF1-213ENST00000574428 NR0B2Q15466 257 aa23.14■■□□□ 1.29
ATPAF1-213ENST00000574428 EPGNQ6UW88 154 aa23.14■■□□□ 1.29
ATPAF1-213ENST00000574428 C19orf60Q96EN9 201 aa23.14■■□□□ 1.29
ATPAF1-213ENST00000574428 BTBD3Q9Y2F9 522 aa23.14■■□□□ 1.29
ATPAF1-213ENST00000574428 LY6G6EA0A0G2JKS1 128 aa23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 MANBAO00462 879 aa23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 HGSO14964 777 aaPredicted RBP23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 CCNDBP1O95273 360 aa23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 PROS1P07225 676 aa23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 LINC00032P0C843 101 aa23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 CMPK1P30085 196 aa23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 HNF4AP41235 474 aa23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 PPM1FP49593 454 aaPredicted RBP23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 CCR8P51685 355 aa23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 ABATP80404 500 aa23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 ABRAXAS2Q15018 415 aa23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 ARMC6Q6NXE6 501 aa23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 ADCK2Q7Z695 626 aa23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 YTHDF3Q7Z739 585 aaKnown RBP23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 ZNF740Q8NDX6 193 aa23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 ABHD11Q8NFV4 315 aa23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 MTFMTQ96DP5 389 aaKnown RBP23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 MAGEB10Q96LZ2 347 aaPredicted RBP23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 EFCAB11Q9BUY7 163 aa23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 WDR55Q9H6Y2 383 aaPredicted RBP23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 PELI2Q9HAT8 420 aa23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 RRP15Q9Y3B9 282 aaKnown RBP23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 ENTPD2Q9Y5L3 495 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms