RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 MRPS30Q9NP92 439 aaKnown RBP15.18■□□□□ 0.02
CHD3-215ENST00000572750 IGSF5Q9NSI5 407 aa15.18■□□□□ 0.02
CHD3-215ENST00000572750 CUEDC1Q9NWM3 386 aaPredicted RBP15.18■□□□□ 0.02
CHD3-215ENST00000572750 TMEM184BQ9Y519 407 aaPredicted RBP15.18■□□□□ 0.02
CHD3-215ENST00000572750 OARD1Q9Y530 152 aa15.18■□□□□ 0.02
CHD3-215ENST00000572750 MYO9AB2RTY4 2548 aa15.17■□□□□ 0.02
CHD3-215ENST00000572750 A0A096LPK6 155 aa15.17■□□□□ 0.02
CHD3-215ENST00000572750 CTSVO60911 334 aa15.17■□□□□ 0.02
CHD3-215ENST00000572750 CCNDBP1O95273 360 aa15.17■□□□□ 0.02
CHD3-215ENST00000572750 NTRK1P04629 796 aa15.17■□□□□ 0.02
CHD3-215ENST00000572750 C2P06681 752 aa15.17■□□□□ 0.02
CHD3-215ENST00000572750 SERPINB9P50453 376 aa15.17■□□□□ 0.02
CHD3-215ENST00000572750 ITGA1P56199 1179 aa15.17■□□□□ 0.02
CHD3-215ENST00000572750 ATP6V0D1P61421 351 aa15.17■□□□□ 0.02
CHD3-215ENST00000572750 TAF1BQ53T94 588 aaPredicted RBP15.17■□□□□ 0.02
CHD3-215ENST00000572750 LRRC69Q6ZNQ3 347 aa15.17■□□□□ 0.02
CHD3-215ENST00000572750 CACNA2D3Q8IZS8 1091 aa15.17■□□□□ 0.02
CHD3-215ENST00000572750 DNAJC22Q8N4W6 341 aa15.17■□□□□ 0.02
CHD3-215ENST00000572750 OR8K5Q8NH50 307 aa15.17■□□□□ 0.02
CHD3-215ENST00000572750 FBXL8Q96CD0 374 aa15.17■□□□□ 0.02
CHD3-215ENST00000572750 FCRL4Q96PJ5 515 aa15.17■□□□□ 0.02
CHD3-215ENST00000572750 SGPP1Q9BX95 441 aa15.17■□□□□ 0.02
CHD3-215ENST00000572750 SPRY4Q9C004 299 aa15.17■□□□□ 0.02
CHD3-215ENST00000572750 CHRNA10Q9GZZ6 450 aa15.17■□□□□ 0.02
CHD3-215ENST00000572750 ALG9Q9H6U8 611 aa15.17■□□□□ 0.02
CHD3-215ENST00000572750 IRAK4Q9NWZ3 460 aa15.17■□□□□ 0.02
CHD3-215ENST00000572750 ZNF180Q9UJW8 692 aa15.17■□□□□ 0.02
CHD3-215ENST00000572750 KLK4Q9Y5K2 254 aa15.17■□□□□ 0.02
CHD3-215ENST00000572750 A0A087X1B8 175 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 OR2A25A4D2G3 310 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 TRIM49D1C9J1S8 452 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 CPNE3O75131 537 aaKnown RBP15.16■□□□□ 0.02
CHD3-215ENST00000572750 OR2B3O76000 313 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 KRT38O76015 456 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 SHBGP04278 402 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 LTA4HP09960 611 aaKnown RBP15.16■□□□□ 0.02
CHD3-215ENST00000572750 TFEBP19484 476 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 TYK2P29597 1187 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 MAGEA12P43365 314 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 GLRBP48167 497 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 PRDX1Q06830 199 aaKnown RBP15.16■□□□□ 0.02
CHD3-215ENST00000572750 TGFBIQ15582 683 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 C18orf21Q32NC0 220 aaPredicted RBP15.16■□□□□ 0.02
CHD3-215ENST00000572750 RNF44Q7L0R7 432 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 ADCK2Q7Z695 626 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 BPHLQ86WA6 291 aaPredicted RBP15.16■□□□□ 0.02
CHD3-215ENST00000572750 GPSM1Q86YR5 675 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 NLGN4XQ8N0W4 816 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 NLGN4YQ8NFZ3 816 aaPredicted RBP15.16■□□□□ 0.02
CHD3-215ENST00000572750 OR56A3Q8NH54 315 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 ATL1Q8WXF7 558 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.16■□□□□ 0.02
CHD3-215ENST00000572750 NKD1Q969G9 470 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 ISL2Q96A47 359 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 DPH1Q9BZG8 443 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 VPS11Q9H270 941 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 SYNPO2LQ9H987 977 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 EURLQ9NYK6 297 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 TLK1Q9UKI8 766 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 PLCL2Q9UPR0 1127 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 ACOT9Q9Y305 439 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 FER1L5A0AVI2 2057 aa15.16■□□□□ 0.02
CHD3-215ENST00000572750 MDC1Q14676 2089 aaKnown RBP15.15■□□□□ 0.02
CHD3-215ENST00000572750 A0A0J9YVX5 310 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 TARM1B6A8C7 271 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 E7EQ34 232 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 H3BMH7 237 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 ZSCAN9O15535 394 aaPredicted RBP15.15■□□□□ 0.02
CHD3-215ENST00000572750 ANXA5P08758 320 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 CCND1P24385 295 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 CNTFP26441 200 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 ATP1A2P50993 1020 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 CDKL1Q00532 357 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 KCNC4Q03721 635 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 NAA25Q14CX7 972 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 FBXO48Q5FWF7 155 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 FRMPD2BQ6IN97 320 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 ZNF425Q6IV72 752 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 CAPN13Q6MZZ7 669 aaPredicted RBP15.15■□□□□ 0.02
CHD3-215ENST00000572750 WDR93Q6P2C0 686 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 C6orf15Q6UXA7 325 aaPredicted RBP15.15■□□□□ 0.02
CHD3-215ENST00000572750 PAQR7Q86WK9 346 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 MCATQ8IVS2 390 aaKnown RBP15.15■□□□□ 0.02
CHD3-215ENST00000572750 GPR135Q8IZ08 494 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 IL22RA1Q8N6P7 574 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 SLC38A9Q8NBW4 561 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 AENQ8WTP8 325 aaKnown RBP15.15■□□□□ 0.02
CHD3-215ENST00000572750 KIAA1191Q96A73 305 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 ZUFSPQ96AP4 578 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 NXNL1Q96CM4 212 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 TSNARE1Q96NA8 513 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 OR4K3Q96R72 315 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 SELENOSQ9BQE4 189 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 PLCD4Q9BRC7 762 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 SPRTNQ9H040 489 aaPredicted RBP15.15■□□□□ 0.02
CHD3-215ENST00000572750 PCBD2Q9H0N5 130 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 ACTR5Q9H9F9 607 aaPredicted RBP15.15■□□□□ 0.02
CHD3-215ENST00000572750 SERTAD3Q9UJW9 196 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 RNF112Q9ULX5 631 aa15.15■□□□□ 0.02
CHD3-215ENST00000572750 SUPT3HB4E1H0 165 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms