RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 NTAN1Q96AB6 310 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 ITPKCQ96DU7 683 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 SCMH1Q96GD3 660 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 MRGPRX2Q96LB1 330 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 CCDC42Q96M95 316 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 NRTNQ99748 197 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 TSGA10Q9BZW7 698 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 SLC26A1Q9H2B4 701 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 PDCL3Q9H2J4 239 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 KIR3DX1Q9H7L2 352 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 INTS7Q9NVH2 962 aaKnown RBP6.55□□□□□ -1.36
CHD3-213ENST00000571249 PKD2L2Q9NZM6 624 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 NXT1Q9UKK6 140 aaKnown RBP6.55□□□□□ -1.36
CHD3-213ENST00000571249 NENFQ9UMX5 172 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 MRFAP1Q9Y605 127 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 BZW2Q9Y6E2 419 aaKnown RBP6.55□□□□□ -1.36
CHD3-213ENST00000571249 A0A0U1RQJ8 604 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 C1orf232A0A0U1RR37 186 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 VSTM2BA6NLU5 285 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 A8MUI8 341 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 BTNL10A8MVZ5 291 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 BTN3A1O00481 513 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 KCNJ13O60928 360 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 POP7O75817 140 aaKnown RBP6.54□□□□□ -1.36
CHD3-213ENST00000571249 PDE9AO76083 593 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 IPO7O95373 1038 aaKnown RBP6.54□□□□□ -1.36
CHD3-213ENST00000571249 ONECUT2O95948 504 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 CYP1A1P04798 512 aaPredicted RBP6.54□□□□□ -1.36
CHD3-213ENST00000571249 GLI4P10075 376 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 ARAFP10398 606 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 SLC9A1P19634 815 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 NME2P22392 152 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 HSPA9P38646 679 aaKnown RBP6.54□□□□□ -1.36
CHD3-213ENST00000571249 CCNFP41002 786 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 PTH2RP49190 550 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 POLR2FP61218 127 aaKnown RBP6.54□□□□□ -1.36
CHD3-213ENST00000571249 EEF1A2Q05639 463 aaKnown RBP6.54□□□□□ -1.36
CHD3-213ENST00000571249 KLC1Q07866 573 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 ITKQ08881 620 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 TUBA3CQ13748 450 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 NFE2L1Q14494 772 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 SPA17Q15506 151 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 OR1C1Q15619 314 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 ZIC1Q15915 447 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 KHDC1Q4VXA5 237 aaKnown RBP6.54□□□□□ -1.36
CHD3-213ENST00000571249 SCYL2Q6P3W7 929 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 TUBA3EQ6PEY2 450 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 VHLLQ6RSH7 139 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 RIPOR1Q6ZS17 1223 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 ENOSF1Q7L5Y1 443 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 ARCQ7LC44 396 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 STRADAQ7RTN6 431 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 GALNTL5Q7Z4T8 443 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 MTERF4Q7Z6M4 381 aaKnown RBP6.54□□□□□ -1.36
CHD3-213ENST00000571249 AMZ2Q86W34 360 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 ARHGAP12Q8IWW6 846 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 BEST3Q8N1M1 668 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 RNF10Q8N5U6 811 aaKnown RBP6.54□□□□□ -1.36
CHD3-213ENST00000571249 ARIH2OSQ8N7S6 290 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.54□□□□□ -1.36
CHD3-213ENST00000571249 TMEM178AQ8NBL3 297 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 FAM98AQ8NCA5 519 aaKnown RBP6.54□□□□□ -1.36
CHD3-213ENST00000571249 OR5M3Q8NGP4 307 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 FAM172AQ8WUF8 416 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 CENPIQ92674 756 aaPredicted RBP6.54□□□□□ -1.36
CHD3-213ENST00000571249 C12orf66Q96MD2 445 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 SYT11Q9BT88 431 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 STK33Q9BYT3 514 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 WWP1Q9H0M0 922 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 SRMSQ9H3Y6 488 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 LZTFL1Q9NQ48 299 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 TEKT2Q9UIF3 430 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 C3orf18Q9UK00 162 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 DNPEPQ9ULA0 475 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 PCDHA13Q9Y5I0 950 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 ALG6Q9Y672 507 aa6.54□□□□□ -1.36
CHD3-213ENST00000571249 CPAMD8Q8IZJ3 1885 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 A0A1B0GX78 115 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 CTAGE9A4FU28 777 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 RGSL1A5PLK6 1076 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 TUBAL3A6NHL2 446 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 EFCAB8A8MWE9 144 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 AKR1B10O60218 316 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 CDC40O60508 579 aaKnown RBP eCLIP6.53□□□□□ -1.36
CHD3-213ENST00000571249 URI1O94763 535 aaPredicted RBP6.53□□□□□ -1.36
CHD3-213ENST00000571249 PGRP06401 933 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 FERP16591 822 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 CXCR2P25025 360 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 RFC1P35251 1148 aaPredicted RBP6.53□□□□□ -1.36
CHD3-213ENST00000571249 THBS2P35442 1172 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 CD96P40200 585 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 OR1D4P47884 311 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 TPI1P60174 286 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 POU4F2Q12837 409 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 KIF5AQ12840 1032 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 GTF2H3Q13889 308 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 KRT33BQ14525 404 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 SLC18A3Q16572 532 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 WHAMMP3Q1A5X7 153 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 GFOD2Q3B7J2 385 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms