RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 MAGEA3P43357 314 aa21.5■■□□□ 1.03
RBFOX1-219ENST00000569895 RELAQ04206 551 aa21.5■■□□□ 1.03
RBFOX1-219ENST00000569895 PTK6Q13882 451 aa21.5■■□□□ 1.03
RBFOX1-219ENST00000569895 PPP1R7Q15435 360 aa21.5■■□□□ 1.03
RBFOX1-219ENST00000569895 PRTGQ2VWP7 1150 aa21.5■■□□□ 1.03
RBFOX1-219ENST00000569895 PRR30Q53SZ7 412 aaPredicted RBP21.5■■□□□ 1.03
RBFOX1-219ENST00000569895 ICE2Q659A1 982 aa21.5■■□□□ 1.03
RBFOX1-219ENST00000569895 UGT3A1Q6NUS8 523 aa21.5■■□□□ 1.03
RBFOX1-219ENST00000569895 NAT8LQ8N9F0 302 aa21.5■■□□□ 1.03
RBFOX1-219ENST00000569895 STT3BQ8TCJ2 826 aa21.5■■□□□ 1.03
RBFOX1-219ENST00000569895 COG1Q8WTW3 980 aa21.5■■□□□ 1.03
RBFOX1-219ENST00000569895 SNRNP40Q96DI7 357 aaKnown RBP21.5■■□□□ 1.03
RBFOX1-219ENST00000569895 OSBPL9Q96SU4 736 aa21.5■■□□□ 1.03
RBFOX1-219ENST00000569895 FBXO5Q9UKT4 447 aa21.5■■□□□ 1.03
RBFOX1-219ENST00000569895 PCSK5Q92824 1860 aa21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 SNRNP200O75643 2136 aaKnown RBP21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 BLACEA4D250 179 aa21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 CYSRT1A8MQ03 144 aa21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 GFYI3L273 518 aa21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 MASP2O00187 686 aa21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 EIF3FO00303 357 aaPredicted RBP21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 NRP2O60462 931 aa21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 EZRP15311 586 aaKnown RBP21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 FBLP22087 321 aaKnown RBP21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 SLC1A2P43004 574 aa21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 YBX1P67809 324 aaKnown RBP21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 KLC1Q07866 573 aa21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 CUL1Q13616 776 aa21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 THEMIS2Q5TEJ8 643 aa21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 GARNL3Q5VVW2 1013 aa21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 LRRC8EQ6NSJ5 796 aa21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 PAQR7Q86WK9 346 aa21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 TMEM151BQ8IW70 566 aa21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 CISD2Q8N5K1 135 aaKnown RBP21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 CSNK1A1LQ8N752 337 aa21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 ZNF480Q8WV37 535 aa21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 SIGLEC10Q96LC7 697 aa21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 SLC30A3Q99726 388 aa21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 LHPPQ9H008 270 aa21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 CUEDC1Q9NWM3 386 aaPredicted RBP21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 FER1L5A0AVI2 2057 aa21.49■■□□□ 1.03
RBFOX1-219ENST00000569895 E7ENX8 843 aa21.48■■□□□ 1.03
RBFOX1-219ENST00000569895 SMAPO00193 183 aa21.48■■□□□ 1.03
RBFOX1-219ENST00000569895 CES2O00748 559 aa21.48■■□□□ 1.03
RBFOX1-219ENST00000569895 TAP2Q03519 686 aa21.48■■□□□ 1.03
RBFOX1-219ENST00000569895 HSP90AA5PQ58FG0 334 aa21.48■■□□□ 1.03
RBFOX1-219ENST00000569895 ZNF425Q6IV72 752 aa21.48■■□□□ 1.03
RBFOX1-219ENST00000569895 ZNF549Q6P9A3 640 aa21.48■■□□□ 1.03
RBFOX1-219ENST00000569895 Q6ZS92 163 aa21.48■■□□□ 1.03
RBFOX1-219ENST00000569895 ADCK2Q7Z695 626 aa21.48■■□□□ 1.03
RBFOX1-219ENST00000569895 PCGF5Q86SE9 256 aa21.48■■□□□ 1.03
RBFOX1-219ENST00000569895 PARP9Q8IXQ6 854 aa21.48■■□□□ 1.03
RBFOX1-219ENST00000569895 OR11G2Q8NGC1 345 aa21.48■■□□□ 1.03
RBFOX1-219ENST00000569895 GPR21Q99679 349 aa21.48■■□□□ 1.03
RBFOX1-219ENST00000569895 WDR77Q9BQA1 342 aaPredicted RBP21.48■■□□□ 1.03
RBFOX1-219ENST00000569895 YIPF2Q9BWQ6 316 aa21.48■■□□□ 1.03
RBFOX1-219ENST00000569895 C3orf18Q9UK00 162 aa21.48■■□□□ 1.03
RBFOX1-219ENST00000569895 MED16Q9Y2X0 877 aa21.48■■□□□ 1.03
RBFOX1-219ENST00000569895 COPG1Q9Y678 874 aaKnown RBP21.48■■□□□ 1.03
RBFOX1-219ENST00000569895 MAP2K7O14733 419 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 HAUS5O94927 633 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 TTC4O95801 387 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 HPP00738 406 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 ANXA5P08758 320 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 ACPPP15309 386 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 PGAM1P18669 254 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 HRH2P25021 359 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 SKIV2L2P42285 1042 aaKnown RBP21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 GLRBP48167 497 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 CYHR1Q6ZMK1 362 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 UBE2R2Q712K3 238 aaPredicted RBP21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 KCNMB4Q86W47 210 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 PALM2Q8IXS6 379 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 SLC35F6Q8N357 371 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 PPFIBP2Q8ND30 876 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 GIMAP7Q8NHV1 300 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 MCOLN3Q8TDD5 553 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 PPP4R1Q8TF05 950 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 C10orf90Q96M02 699 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 EPS8L2Q9H6S3 715 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 IARS2Q9NSE4 1012 aaKnown RBP21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 ABCF3Q9NUQ8 709 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 STOX2Q9P2F5 926 aaPredicted RBP21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 TRPC4Q9UBN4 977 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 TRMT6Q9UJA5 497 aaKnown RBP21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 RUVBL1Q9Y265 456 aaKnown RBP21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 COL12A1Q99715 3063 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 RELNP78509 3460 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 FLNCQ14315 2725 aa21.47■■□□□ 1.03
RBFOX1-219ENST00000569895 IGLV3-12A0A075B6K2 115 aa21.46■■□□□ 1.03
RBFOX1-219ENST00000569895 IGKV1-8A0A0C4DH67 115 aa21.46■■□□□ 1.03
RBFOX1-219ENST00000569895 PCDH17O14917 1159 aa21.46■■□□□ 1.03
RBFOX1-219ENST00000569895 MED26O95402 600 aa21.46■■□□□ 1.03
RBFOX1-219ENST00000569895 CXCR2P25025 360 aa21.46■■□□□ 1.03
RBFOX1-219ENST00000569895 RGS4P49798 205 aa21.46■■□□□ 1.03
RBFOX1-219ENST00000569895 DSG2Q14126 1118 aa21.46■■□□□ 1.03
RBFOX1-219ENST00000569895 NDUFA9Q16795 377 aa21.46■■□□□ 1.03
RBFOX1-219ENST00000569895 EIF2S3LQ2VIR3 472 aaKnown RBP21.46■■□□□ 1.03
RBFOX1-219ENST00000569895 RNASEH2BQ5TBB1 312 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms