RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 SLC24A4Q8NFF2 622 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 OR6C4Q8NGE1 309 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 OCC1Q8TAD7 63 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 UBLCP1Q8WVY7 318 aaPredicted RBP4.5□□□□□ -1.69
CHD9-220ENST00000569794 AP2M1Q96CW1 435 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 MTBPQ96DY7 904 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 DTD2Q96FN9 168 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 ZC3HAV1LQ96H79 300 aaKnown RBP4.5□□□□□ -1.69
CHD9-220ENST00000569794 CNOT6LQ96LI5 555 aaKnown RBP4.5□□□□□ -1.69
CHD9-220ENST00000569794 OR1F2PQ96R84 312 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 SSX3Q99909 188 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 TMEM47Q9BQJ4 181 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 KRTAP4-3Q9BYR4 195 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 CCSER1Q9C0I3 900 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 TKTL2Q9H0I9 626 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 DDX47Q9H0S4 455 aaKnown RBP4.5□□□□□ -1.69
CHD9-220ENST00000569794 KCNK15Q9H427 330 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 CLSTN2Q9H4D0 955 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 ZNF696Q9H7X3 374 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 SRD5A3Q9H8P0 318 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 CHMP1AQ9HD42 196 aaPredicted RBP4.5□□□□□ -1.69
CHD9-220ENST00000569794 DDX4Q9NQI0 724 aaKnown RBP4.5□□□□□ -1.69
CHD9-220ENST00000569794 FAM212BQ9NTI7 297 aaPredicted RBP4.5□□□□□ -1.69
CHD9-220ENST00000569794 ZFP57Q9NU63 452 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 OR6C3Q9NZP0 311 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 RAI14Q9P0K7 980 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 LARSQ9P2J5 1176 aaKnown RBP4.5□□□□□ -1.69
CHD9-220ENST00000569794 BAIAP2L1Q9UHR4 511 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 KCNK6Q9Y257 313 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 TYW5A2RUC4 315 aaKnown RBP4.49□□□□□ -1.69
CHD9-220ENST00000569794 J3KR12 359 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 TO15178 435 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 TEX28O15482 410 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 NUDT21O43809 227 aaKnown RBP4.49□□□□□ -1.69
CHD9-220ENST00000569794 FGF17O60258 216 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 ERLIN1O75477 346 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 VNN2O95498 520 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 HNRNPA2B1P22626 353 aaKnown RBP4.49□□□□□ -1.69
CHD9-220ENST00000569794 CENPAP49450 140 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 SMSP52788 366 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 CLDN2P57739 230 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 SRP54P61011 504 aaKnown RBP4.49□□□□□ -1.69
CHD9-220ENST00000569794 SIRPAP78324 504 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 SORDQ00796 357 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 PRKCZQ05513 592 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 GRIK3Q13003 919 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 GIT2Q14161 759 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 UGCGQ16739 394 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 FILIP1LQ4L180 1135 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 CFAP157Q5JU67 520 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 ZNF772Q68DY9 489 aaPredicted RBP4.49□□□□□ -1.69
CHD9-220ENST00000569794 NHLRC1Q6VVB1 395 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 TAS2R42Q7RTR8 314 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 TBC1D26Q86UD7 250 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 HAPLN4Q86UW8 402 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 ZNF573Q86YE8 665 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 ZNF595Q8IYB9 648 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 CLEC1AQ8NC01 280 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 SELENOMQ8WWX9 145 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 NSMAFQ92636 917 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 CCDC51Q96ER9 411 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 HARBI1Q96MB7 349 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 MOV10L1Q9BXT6 1211 aaKnown RBP4.49□□□□□ -1.69
CHD9-220ENST00000569794 TFB2MQ9H5Q4 396 aaKnown RBP4.49□□□□□ -1.69
CHD9-220ENST00000569794 RPF1Q9H9Y2 349 aaKnown RBP4.49□□□□□ -1.69
CHD9-220ENST00000569794 CRLF2Q9HC73 371 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 TRPV5Q9NQA5 729 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 KLHL1Q9NR64 748 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 PRMT7Q9NVM4 692 aaPredicted RBP4.49□□□□□ -1.69
CHD9-220ENST00000569794 COPG2Q9UBF2 871 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 DNAJB4Q9UDY4 337 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 FBXO40Q9UH90 709 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 PLEKHA6Q9Y2H5 1048 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 LSM4Q9Y4Z0 139 aaKnown RBP4.49□□□□□ -1.69
CHD9-220ENST00000569794 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.49□□□□□ -1.69
CHD9-220ENST00000569794 NISCHQ9Y2I1 1504 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 DHX29Q7Z478 1369 aaKnown RBP4.49□□□□□ -1.69
CHD9-220ENST00000569794 PIK3R4Q99570 1358 aa4.49□□□□□ -1.69
CHD9-220ENST00000569794 A0A087WZY1 265 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 A0A1W2PPM1 405 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 FAM47DPA6NHR8 397 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 TRIM77I1YAP6 450 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 CXCL11O14625 94 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 ATP2A1O14983 1001 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 CTDSPLO15194 276 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 CLDN3O15551 220 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 JRKO75564 520 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 SPAG6O75602 509 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 IDH1O75874 414 aaKnown RBP4.48□□□□□ -1.69
CHD9-220ENST00000569794 PGLSO95336 258 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 ASGR1P07306 291 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 RNF224P0DH78 156 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 THRBP10828 461 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 EPB41P11171 864 aaKnown RBP4.48□□□□□ -1.69
CHD9-220ENST00000569794 G6PDP11413 515 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 PCNAP12004 261 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 LBPP18428 481 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 DNAJB1P25685 340 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 ACADLP28330 430 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 TIMP3P35625 211 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms