RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 EIF2B5Q13144 721 aaKnown RBP10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 ART3Q13508 389 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 TIGD2Q4W5G0 525 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 ATG9BQ674R7 924 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 NXPE4Q6UWF7 544 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 HPS6Q86YV9 775 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 PARP9Q8IXQ6 854 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 HUS1BQ8NHY5 278 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 THEGQ9P2T0 379 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 DMTF1Q9Y222 760 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 C1GALT1C1LP0DN25 315 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 TACR1P25103 407 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 MAOBP27338 520 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 STX5Q13190 355 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 FZD2Q14332 565 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 KRT33BQ14525 404 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 ARHGAP19Q14CB8 494 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 PGM2L1Q6PCE3 622 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 LCTLQ6UWM7 567 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 FAM20CQ8IXL6 584 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 KRTCAP2Q8N6L1 136 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 RNF148Q8N7C7 305 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 SPDL1Q96EA4 605 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 WDR34Q96EX3 536 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 APOLD1Q96LR9 279 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 IL1RL2Q9HB29 575 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 AASDHPPTQ9NRN7 309 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 GPR27Q9NS67 375 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 ZIM2Q9NZV7 527 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 SPATA7Q9P0W8 599 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 MAP10Q9P2G4 905 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 ZNF624Q9P2J8 865 aaPredicted RBP10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 PCDHGA7Q9Y5G6 932 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 A6NCN8 305 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 PDGFBP01127 241 aaPredicted RBP10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 BCKDHAP12694 445 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 PKLRP30613 574 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 POLR2JP52435 117 aaKnown RBP10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 DMWDQ09019 674 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 C16orf89Q6UX73 402 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 PACS2Q86VP3 889 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 PGAM4Q8N0Y7 254 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 MAGEB10Q96LZ2 347 aaPredicted RBP10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 EBPLQ9BY08 206 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 RASSF4Q9H2L5 321 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 SPATA6Q9NWH7 488 aaPredicted RBP10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 GOLGA4Q13439 2230 aaKnown RBP10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 SPTY2D1-AS1A0A0U1RR47 76 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 RAB28P51157 221 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 USP39Q53GS9 565 aaKnown RBP10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 MED27Q6P2C8 311 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 ABRAXAS1Q6UWZ7 409 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 UBALD2Q8IYN6 164 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 ARHGAP24Q8N264 748 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 PATE1Q8WXA2 126 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 SMPDL3AQ92484 453 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 SH3KBP1Q96B97 665 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 CDRT15Q96T59 188 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 EIF3LQ9Y262 564 aaKnown RBP10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 PCDHGA11Q9Y5H2 935 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 A0A0C4DFX4 3053 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 CROCCQ5TZA2 2017 aa10.54□□□□□ -0.72
PDXDC1-216ENST00000569715 WNT1P04628 370 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 AMD1P17707 334 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 PRPH2P23942 346 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 CCND1P24385 295 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 DGKQP52824 942 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 KCNK10P57789 538 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 RPS13P62277 151 aaKnown RBP10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 CSTF3Q12996 717 aaKnown RBP10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 PAGE3Q5JUK9 113 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 PHACTR4Q8IZ21 702 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 SETD7Q8WTS6 366 aaKnown RBP10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 CMTM7Q96FZ5 175 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 TRIM8Q9BZR9 551 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 MVB12BQ9H7P6 319 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 SIT1Q9Y3P8 196 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 SERTM1A2A2V5 107 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 K7ESF4 209 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 ANGPT2O15123 496 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 AXIN1O15169 862 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 NDUFS2O75306 463 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 SDC1P18827 310 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 BCKDHBP21953 392 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 PEBP1P30086 187 aaKnown RBP10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 MSX2P35548 267 aaPredicted RBP10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 PSME3P61289 254 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 GRIK2Q13002 908 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 CEACAM7Q14002 265 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 BNC2Q6ZN30 1099 aaPredicted RBP10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 C17orf64Q86WR6 236 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 FAM129CQ86XR2 697 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 HAUS8Q9BT25 410 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 EFCAB11Q9BUY7 163 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 EHD1Q9H4M9 534 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 PRM3Q9NNZ6 103 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 TRNAU1APQ9NX07 287 aaKnown RBP10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 DGKBQ9Y6T7 804 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 SPAG17Q6Q759 2223 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 MYO15AQ9UKN7 3530 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms