RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 SPTLC3Q9NUV7 552 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 ZNHIT6Q9NWK9 470 aaKnown RBP11.83□□□□□ -0.52
SNX29-207ENST00000568949 STOX2Q9P2F5 926 aaPredicted RBP11.83□□□□□ -0.52
SNX29-207ENST00000568949 CIDEBQ9UHD4 219 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 ABCA4P78363 2273 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 HEATR5BQ9P2D3 2071 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 CCDC162PA2VCL2 907 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 OR2A25A4D2G3 310 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 OR51F1A6NGY5 319 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 NPIPA5E9PKD4 350 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 H0YGG7 62 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 OR1I1O60431 355 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 PHF2O75151 1096 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 APOA4P06727 396 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 RBP3P10745 1247 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 HADHBP55084 474 aaKnown RBP11.82□□□□□ -0.52
SNX29-207ENST00000568949 EIF3EP60228 445 aaKnown RBP11.82□□□□□ -0.52
SNX29-207ENST00000568949 COPS2P61201 443 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 ARF3P61204 181 aaPredicted RBP11.82□□□□□ -0.52
SNX29-207ENST00000568949 GARNL3Q5VVW2 1013 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 H3F3CQ6NXT2 135 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 FBXO42Q6P3S6 717 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 TTC23LQ6PF05 361 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 DARS2Q6PI48 645 aaKnown RBP11.82□□□□□ -0.52
SNX29-207ENST00000568949 GHDCQ8N2G8 530 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 MDS2Q8NDY4 140 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 OR2A1Q8NGT9 310 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 AGAP11Q8TF27 550 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 SCMH1Q96GD3 660 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 CCDC42Q96M95 316 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 MIPEPQ99797 713 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 LRRC40Q9H9A6 602 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 COQ3Q9NZJ6 369 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 TNFRSF10DQ9UBN6 386 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 MKL2Q9ULH7 1088 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 NPIPA1Q9UND3 350 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 EFR3BQ9Y2G0 817 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.82□□□□□ -0.52
SNX29-207ENST00000568949 MRFAP1Q9Y605 127 aa11.82□□□□□ -0.52
SNX29-207ENST00000568949 PRRC2AP48634 2157 aaKnown RBP11.82□□□□□ -0.52
SNX29-207ENST00000568949 NIPBLQ6KC79 2804 aaeCLIP11.82□□□□□ -0.52
SNX29-207ENST00000568949 ACANP16112 2415 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 A8MUI8 341 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 FOXO6A8MYZ6 492 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 FFAR3O14843 346 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 GPR42O15529 346 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 ASNA1O43681 348 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 NRP2O60462 931 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 FAM155BO75949 473 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 TSPAN12O95859 305 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 TPM3P06753 285 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 CYC1P08574 325 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 ANXA5P08758 320 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 C8orf89P0DMQ9 161 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 CD46P15529 392 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 ABOP16442 354 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 IGFBP2P18065 325 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 PSMB5P28074 263 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 EEF1DP29692 281 aaKnown RBP11.81□□□□□ -0.52
SNX29-207ENST00000568949 MARCKSL1P49006 195 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 TUBA3CQ13748 450 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 TMED2Q15363 201 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 PARP6Q2NL67 630 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 ACER2Q5QJU3 275 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 PLAG1Q6DJT9 500 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 TUBA3EQ6PEY2 450 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 NCCRP1Q6ZVX7 275 aaPredicted RBP11.81□□□□□ -0.52
SNX29-207ENST00000568949 DOLPP1Q86YN1 238 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 SIAH3Q8IW03 269 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 ZC3H7AQ8IWR0 971 aaKnown RBP11.81□□□□□ -0.52
SNX29-207ENST00000568949 BEST3Q8N1M1 668 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 TMEM178AQ8NBL3 297 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 FAM98AQ8NCA5 519 aaKnown RBP11.81□□□□□ -0.52
SNX29-207ENST00000568949 SDCCAG3Q96C92 435 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 MMABQ96EY8 250 aaPredicted RBP11.81□□□□□ -0.52
SNX29-207ENST00000568949 FRMD6Q96NE9 622 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 CHP1Q99653 195 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 UTP23Q9BRU9 249 aaKnown RBP11.81□□□□□ -0.52
SNX29-207ENST00000568949 TMEM121Q9BTD3 319 aa11.81□□□□□ -0.52
SNX29-207ENST00000568949 RUVBL1Q9Y265 456 aaKnown RBP11.81□□□□□ -0.52
SNX29-207ENST00000568949 A0A1W2PPV9 198 aa11.8□□□□□ -0.52
SNX29-207ENST00000568949 SYCE3A1L190 88 aa11.8□□□□□ -0.52
SNX29-207ENST00000568949 MACROD2A1Z1Q3 448 aa11.8□□□□□ -0.52
SNX29-207ENST00000568949 PRRG2O14669 202 aa11.8□□□□□ -0.52
SNX29-207ENST00000568949 ADAM10O14672 748 aa11.8□□□□□ -0.52
SNX29-207ENST00000568949 VPS26AO75436 327 aa11.8□□□□□ -0.52
SNX29-207ENST00000568949 C1orf105O95561 183 aa11.8□□□□□ -0.52
SNX29-207ENST00000568949 CTNNA2P26232 953 aa11.8□□□□□ -0.52
SNX29-207ENST00000568949 AOAHP28039 575 aa11.8□□□□□ -0.52
SNX29-207ENST00000568949 CMPK1P30085 196 aa11.8□□□□□ -0.52
SNX29-207ENST00000568949 PPARGP37231 505 aaPredicted RBP11.8□□□□□ -0.52
SNX29-207ENST00000568949 CD96P40200 585 aa11.8□□□□□ -0.52
SNX29-207ENST00000568949 OR1C1Q15619 314 aa11.8□□□□□ -0.52
SNX29-207ENST00000568949 MEP1AQ16819 746 aa11.8□□□□□ -0.52
SNX29-207ENST00000568949 AFTPHQ6ULP2 937 aa11.8□□□□□ -0.52
SNX29-207ENST00000568949 CPEB2Q7Z5Q1 589 aaKnown RBP11.8□□□□□ -0.52
SNX29-207ENST00000568949 LUZP1Q86V48 1076 aa11.8□□□□□ -0.52
SNX29-207ENST00000568949 ARHGEF39Q8N4T4 335 aa11.8□□□□□ -0.52
SNX29-207ENST00000568949 CSNK1A1LQ8N752 337 aa11.8□□□□□ -0.52
SNX29-207ENST00000568949 AMER2Q8N7J2 671 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms