RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 CUL1Q13616 776 aa18.03■□□□□ 0.48
SPSB3-210ENST00000568416 EIF2S3LQ2VIR3 472 aaKnown RBP18.03■□□□□ 0.48
SPSB3-210ENST00000568416 ICE2Q659A1 982 aa18.03■□□□□ 0.48
SPSB3-210ENST00000568416 CYHR1Q6ZMK1 362 aa18.03■□□□□ 0.48
SPSB3-210ENST00000568416 CUZD1Q86UP6 607 aa18.03■□□□□ 0.48
SPSB3-210ENST00000568416 LMNTD2Q8IXW0 634 aa18.03■□□□□ 0.48
SPSB3-210ENST00000568416 PPFIBP2Q8ND30 876 aa18.03■□□□□ 0.48
SPSB3-210ENST00000568416 SSC4DQ8WTU2 575 aa18.03■□□□□ 0.48
SPSB3-210ENST00000568416 ZNF480Q8WV37 535 aa18.03■□□□□ 0.48
SPSB3-210ENST00000568416 ASB11Q8WXH4 323 aa18.03■□□□□ 0.48
SPSB3-210ENST00000568416 MESP1Q9BRJ9 268 aa18.03■□□□□ 0.48
SPSB3-210ENST00000568416 CRB3Q9BUF7 120 aa18.03■□□□□ 0.48
SPSB3-210ENST00000568416 ZNF282Q9UDV7 671 aaPredicted RBP18.03■□□□□ 0.48
SPSB3-210ENST00000568416 TAC3Q9UHF0 121 aa18.03■□□□□ 0.48
SPSB3-210ENST00000568416 DHRS7Q9Y394 339 aa18.03■□□□□ 0.48
SPSB3-210ENST00000568416 PCDHGA10Q9Y5H3 936 aa18.03■□□□□ 0.48
SPSB3-210ENST00000568416 ZNF839A8K0R7 811 aa18.02■□□□□ 0.48
SPSB3-210ENST00000568416 E7ENX8 843 aa18.02■□□□□ 0.48
SPSB3-210ENST00000568416 GFYI3L273 518 aa18.02■□□□□ 0.48
SPSB3-210ENST00000568416 PGRMC1O00264 195 aaKnown RBP18.02■□□□□ 0.48
SPSB3-210ENST00000568416 CCNDBP1O95273 360 aa18.02■□□□□ 0.48
SPSB3-210ENST00000568416 SLC16A8O95907 504 aa18.02■□□□□ 0.48
SPSB3-210ENST00000568416 ZGLP1P0C6A0 271 aa18.02■□□□□ 0.48
SPSB3-210ENST00000568416 ENO3P13929 434 aaPredicted RBP18.02■□□□□ 0.48
SPSB3-210ENST00000568416 TAP2Q03519 686 aa18.02■□□□□ 0.48
SPSB3-210ENST00000568416 OCA2Q04671 838 aa18.02■□□□□ 0.48
SPSB3-210ENST00000568416 LONRF1Q17RB8 773 aa18.02■□□□□ 0.48
SPSB3-210ENST00000568416 PARP9Q8IXQ6 854 aa18.02■□□□□ 0.48
SPSB3-210ENST00000568416 LRRC56Q8IYG6 542 aaPredicted RBP18.02■□□□□ 0.48
SPSB3-210ENST00000568416 CD200R1Q8TD46 325 aa18.02■□□□□ 0.48
SPSB3-210ENST00000568416 PPP4R1Q8TF05 950 aa18.02■□□□□ 0.48
SPSB3-210ENST00000568416 MIEF2Q96C03 454 aa18.02■□□□□ 0.48
SPSB3-210ENST00000568416 VPS50Q96JG6 964 aa18.02■□□□□ 0.48
SPSB3-210ENST00000568416 CABS1Q96KC9 395 aa18.02■□□□□ 0.48
SPSB3-210ENST00000568416 OR2A5Q96R48 311 aa18.02■□□□□ 0.48
SPSB3-210ENST00000568416 NAP1L3Q99457 506 aaPredicted RBP18.02■□□□□ 0.48
SPSB3-210ENST00000568416 BARD1Q99728 777 aaKnown RBP18.02■□□□□ 0.48
SPSB3-210ENST00000568416 WDR77Q9BQA1 342 aaPredicted RBP18.02■□□□□ 0.48
SPSB3-210ENST00000568416 CCDC68Q9H2F9 335 aa18.02■□□□□ 0.48
SPSB3-210ENST00000568416 C20orf96Q9NUD7 363 aaPredicted RBP18.02■□□□□ 0.48
SPSB3-210ENST00000568416 CUEDC1Q9NWM3 386 aaPredicted RBP18.02■□□□□ 0.48
SPSB3-210ENST00000568416 CSAG2Q9Y5P2 127 aa18.02■□□□□ 0.48
SPSB3-210ENST00000568416 COMMD10Q9Y6G5 202 aa18.02■□□□□ 0.48
SPSB3-210ENST00000568416 CBX6O95503 412 aa18.01■□□□□ 0.47
SPSB3-210ENST00000568416 RNF224P0DH78 156 aa18.01■□□□□ 0.47
SPSB3-210ENST00000568416 FBLP22087 321 aaKnown RBP18.01■□□□□ 0.47
SPSB3-210ENST00000568416 SKIV2L2P42285 1042 aaKnown RBP18.01■□□□□ 0.47
SPSB3-210ENST00000568416 ABATP80404 500 aa18.01■□□□□ 0.47
SPSB3-210ENST00000568416 RELAQ04206 551 aa18.01■□□□□ 0.47
SPSB3-210ENST00000568416 Q0VFX4 171 aa18.01■□□□□ 0.47
SPSB3-210ENST00000568416 TSTA3Q13630 321 aaPredicted RBP18.01■□□□□ 0.47
SPSB3-210ENST00000568416 NR6A1Q15406 480 aa18.01■□□□□ 0.47
SPSB3-210ENST00000568416 VWA2Q5GFL6 755 aa18.01■□□□□ 0.47
SPSB3-210ENST00000568416 AGAP7PQ5VUJ5 663 aa18.01■□□□□ 0.47
SPSB3-210ENST00000568416 ARHGEF39Q8N4T4 335 aa18.01■□□□□ 0.47
SPSB3-210ENST00000568416 CSNK1A1LQ8N752 337 aa18.01■□□□□ 0.47
SPSB3-210ENST00000568416 CALML6Q8TD86 181 aa18.01■□□□□ 0.47
SPSB3-210ENST00000568416 ACTRT1Q8TDG2 376 aa18.01■□□□□ 0.47
SPSB3-210ENST00000568416 COG1Q8WTW3 980 aa18.01■□□□□ 0.47
SPSB3-210ENST00000568416 MVB12AQ96EY5 273 aa18.01■□□□□ 0.47
SPSB3-210ENST00000568416 AGAP4Q96P64 663 aa18.01■□□□□ 0.47
SPSB3-210ENST00000568416 GPR21Q99679 349 aa18.01■□□□□ 0.47
SPSB3-210ENST00000568416 LHPPQ9H008 270 aa18.01■□□□□ 0.47
SPSB3-210ENST00000568416 C3orf18Q9UK00 162 aa18.01■□□□□ 0.47
SPSB3-210ENST00000568416 FBXO5Q9UKT4 447 aa18.01■□□□□ 0.47
SPSB3-210ENST00000568416 CDC14AQ9UNH5 594 aa18.01■□□□□ 0.47
SPSB3-210ENST00000568416 RUVBL1Q9Y265 456 aaKnown RBP18.01■□□□□ 0.47
SPSB3-210ENST00000568416 NTNG1Q9Y2I2 539 aa18.01■□□□□ 0.47
SPSB3-210ENST00000568416 COPG1Q9Y678 874 aaKnown RBP18.01■□□□□ 0.47
SPSB3-210ENST00000568416 MAD1L1Q9Y6D9 718 aa18.01■□□□□ 0.47
SPSB3-210ENST00000568416 FLNCQ14315 2725 aa18■□□□□ 0.47
SPSB3-210ENST00000568416 PCM1Q15154 2024 aa18■□□□□ 0.47
SPSB3-210ENST00000568416 SMAPO00193 183 aa18■□□□□ 0.47
SPSB3-210ENST00000568416 PRPF4O43172 522 aaKnown RBP eCLIP18■□□□□ 0.47
SPSB3-210ENST00000568416 HAUS5O94927 633 aa18■□□□□ 0.47
SPSB3-210ENST00000568416 HPP00738 406 aa18■□□□□ 0.47
SPSB3-210ENST00000568416 EZRP15311 586 aaKnown RBP18■□□□□ 0.47
SPSB3-210ENST00000568416 GLRBP48167 497 aa18■□□□□ 0.47
SPSB3-210ENST00000568416 FNTAP49354 379 aa18■□□□□ 0.47
SPSB3-210ENST00000568416 MPP1Q00013 466 aa18■□□□□ 0.47
SPSB3-210ENST00000568416 DSG2Q14126 1118 aa18■□□□□ 0.47
SPSB3-210ENST00000568416 HIF1AQ16665 826 aa18■□□□□ 0.47
SPSB3-210ENST00000568416 HKDC1Q2TB90 917 aa18■□□□□ 0.47
SPSB3-210ENST00000568416 IRAK1BP1Q5VVH5 260 aa18■□□□□ 0.47
SPSB3-210ENST00000568416 GARNL3Q5VVW2 1013 aa18■□□□□ 0.47
SPSB3-210ENST00000568416 ATG9BQ674R7 924 aa18■□□□□ 0.47
SPSB3-210ENST00000568416 PPIL6Q8IXY8 311 aa18■□□□□ 0.47
SPSB3-210ENST00000568416 CPNE9Q8IYJ1 553 aa18■□□□□ 0.47
SPSB3-210ENST00000568416 PRSS58Q8IYP2 241 aa18■□□□□ 0.47
SPSB3-210ENST00000568416 PRR7Q8TB68 274 aa18■□□□□ 0.47
SPSB3-210ENST00000568416 GRK7Q8WTQ7 553 aa18■□□□□ 0.47
SPSB3-210ENST00000568416 THOC3Q96J01 351 aaKnown RBP18■□□□□ 0.47
SPSB3-210ENST00000568416 OSBPL9Q96SU4 736 aa18■□□□□ 0.47
SPSB3-210ENST00000568416 AARSD1Q9BTE6 412 aaKnown RBP18■□□□□ 0.47
SPSB3-210ENST00000568416 UTP6Q9NYH9 597 aaKnown RBP18■□□□□ 0.47
SPSB3-210ENST00000568416 NOVA2Q9UNW9 492 aaKnown RBP18■□□□□ 0.47
SPSB3-210ENST00000568416 SHANK1Q9Y566 2161 aa18■□□□□ 0.47
SPSB3-210ENST00000568416 NUP210LQ5VU65 1888 aa17.99■□□□□ 0.47
SPSB3-210ENST00000568416 SEC16AO15027 2179 aa17.99■□□□□ 0.47
SPSB3-210ENST00000568416 EIF3FO00303 357 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms