RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	OR5M3	Q8NGP4	307 aa		13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	OR10Q1	Q8NGQ4	319 aa		13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	BTBD6	Q96KE9	485 aa		13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	MKKS	Q9NPJ1	570 aa	Predicted RBP	13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	DMRT3	Q9NQL9	472 aa		13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	CRIM1	Q9NZV1	1036 aa		13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	ANAPC7	Q9UJX3	599 aa		13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	ARL5A	Q9Y689	179 aa		13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	ATR	Q13535	2644 aa		13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	C2orf81	A6NN90	581 aa		13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	AGAP14	A8MT82	685 aa		13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	LIN7A	O14910	233 aa	Predicted RBP	13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	PPP1R12A	O14974	1030 aa	Predicted RBP	13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	ARHGEF9	O43307	516 aa		13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	NME2P1	O60361	137 aa		13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	SLC25A12	O75746	678 aa		13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	NEURL1	O76050	574 aa		13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	EIF2S1	P05198	315 aa	Known RBP	13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	ERVK-10	P10266	1014 aa		13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	ITGAL	P20701	1170 aa		13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	NME2	P22392	152 aa		13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	ACADL	P28330	430 aa		13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	PKLR	P30613	574 aa		13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	ZFP36L2	P47974	494 aa	Known RBP	13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	PDK1	Q15118	436 aa		13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	SF1	Q15637	639 aa	Known RBP	13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	TAX1BP1	Q86VP1	789 aa		13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	POGLUT1	Q8NBL1	392 aa		13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	OR4K2	Q8NGD2	314 aa		13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	CABS1	Q96KC9	395 aa		13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	SARG	Q9BW04	601 aa		13.01	□□□□□ -0.33
SMG1-213	ENST00000567737	STOX2	Q9P2F5	926 aa	Predicted RBP	13.01	□□□□□ -0.33
SMG1-213	ENST00000567737		A0A0J9YVX5	310 aa		13	□□□□□ -0.33
SMG1-213	ENST00000567737	TARM1	B6A8C7	271 aa		13	□□□□□ -0.33
SMG1-213	ENST00000567737		H7C1Q1	480 aa		13	□□□□□ -0.33
SMG1-213	ENST00000567737	CTSV	O60911	334 aa		13	□□□□□ -0.33
SMG1-213	ENST00000567737	ANXA5	P08758	320 aa		13	□□□□□ -0.33
SMG1-213	ENST00000567737	TFEB	P19484	476 aa		13	□□□□□ -0.33
SMG1-213	ENST00000567737	DCAF7	P61962	342 aa		13	□□□□□ -0.33
SMG1-213	ENST00000567737	FRMPD2B	Q6IN97	320 aa		13	□□□□□ -0.33
SMG1-213	ENST00000567737	ARHGAP11A	Q6P4F7	1023 aa		13	□□□□□ -0.33
SMG1-213	ENST00000567737	C2orf73	Q8N5S3	287 aa	Predicted RBP	13	□□□□□ -0.33
SMG1-213	ENST00000567737	LINC01555	Q8NAE3	123 aa		13	□□□□□ -0.33
SMG1-213	ENST00000567737	ZUFSP	Q96AP4	578 aa		13	□□□□□ -0.33
SMG1-213	ENST00000567737	MVB12A	Q96EY5	273 aa		13	□□□□□ -0.33
SMG1-213	ENST00000567737	MRGPRX2	Q96LB1	330 aa		13	□□□□□ -0.33
SMG1-213	ENST00000567737	C10orf90	Q96M02	699 aa		13	□□□□□ -0.33
SMG1-213	ENST00000567737	TGIF2	Q9GZN2	237 aa		13	□□□□□ -0.33
SMG1-213	ENST00000567737	FAM96A	Q9H5X1	160 aa		13	□□□□□ -0.33
SMG1-213	ENST00000567737	HAUS4	Q9H6D7	363 aa		13	□□□□□ -0.33
SMG1-213	ENST00000567737	PRM3	Q9NNZ6	103 aa		13	□□□□□ -0.33
SMG1-213	ENST00000567737	BEX4	Q9NWD9	120 aa	Predicted RBP	13	□□□□□ -0.33
SMG1-213	ENST00000567737	ZDHHC3	Q9NYG2	299 aa		13	□□□□□ -0.33
SMG1-213	ENST00000567737	SNRNP200	O75643	2136 aa	Known RBP	13	□□□□□ -0.33
SMG1-213	ENST00000567737	IGHV3-20	A0A0C4DH32	117 aa		12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	SMAD7	O15105	426 aa	Known RBP	12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	FKBP9	O95302	570 aa		12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	XIAP	P98170	497 aa		12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	BRD3	Q15059	726 aa		12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	TAF1A	Q15573	450 aa	Predicted RBP	12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	FLYWCH1	Q4VC44	716 aa		12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	CPEB2	Q7Z5Q1	589 aa	Known RBP	12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	SNX20	Q7Z614	316 aa		12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	CIART	Q8N365	385 aa	Predicted RBP	12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	SLC5A8	Q8N695	610 aa		12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	PLD5	Q8N7P1	536 aa		12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	ARMC2	Q8NEN0	867 aa		12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	IPMK	Q8NFU5	416 aa		12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	FAM222B	Q8WU58	562 aa		12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	MMAB	Q96EY8	250 aa	Predicted RBP	12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	TEKT5	Q96M29	485 aa		12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	RNF157	Q96PX1	679 aa		12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	NPAS2	Q99743	824 aa		12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	FSD1L	Q9BXM9	530 aa		12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	C19orf25	Q9UFG5	118 aa	Predicted RBP	12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	HIVEP2	P31629	2446 aa		12.99	□□□□□ -0.33
SMG1-213	ENST00000567737	LOC105369274	A0A096LPK9	316 aa		12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	LOC102723532	A0A0G2JNH3	316 aa		12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	MYO1F	O00160	1098 aa		12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	HS6ST1	O60243	411 aa		12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	MAN1A2	O60476	641 aa		12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	NFKB1	P19838	968 aa		12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	CD9	P21926	228 aa		12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	PTPN3	P26045	913 aa		12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	UBXN1	Q04323	297 aa		12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	EXT1	Q16394	746 aa		12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	SLC25A35	Q3KQZ1	300 aa		12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	SYTL3	Q4VX76	610 aa		12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	C16orf47	Q6ZP98	133 aa	Predicted RBP	12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	ZNF571	Q7Z3V5	609 aa	Predicted RBP	12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	TMTC1	Q8IUR5	882 aa		12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	P3H2	Q8IVL5	708 aa		12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	OR4N4	Q8N0Y3	316 aa		12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	CLDN19	Q8N6F1	224 aa		12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	AMER3	Q8N944	861 aa		12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	M1AP	Q8TC57	530 aa		12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	ELMO1	Q92556	727 aa		12.98	□□□□□ -0.33
SMG1-213	ENST00000567737	TMEM125	Q96AQ2	219 aa		12.98	□□□□□ -0.33

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