RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 NOVA2Q9UNW9 492 aaKnown RBP17.76■□□□□ 0.43
LINC01238-205ENST00000567549 CRYL1Q9Y2S2 319 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 MAU2Q9Y6X3 613 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 HIVEP3Q5T1R4 2406 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 NSG1A0A0A6YYJ2 146 aa17.75■□□□□ 0.43
LINC01238-205ENST00000567549 FAM237BA0A1B0GVD1 139 aa17.75■□□□□ 0.43
LINC01238-205ENST00000567549 MYO1CO00159 1063 aa17.75■□□□□ 0.43
LINC01238-205ENST00000567549 ZBTB14O43829 449 aa17.75■□□□□ 0.43
LINC01238-205ENST00000567549 PSMB5P28074 263 aa17.75■□□□□ 0.43
LINC01238-205ENST00000567549 KLC1Q07866 573 aa17.75■□□□□ 0.43
LINC01238-205ENST00000567549 MFAP5Q13361 173 aa17.75■□□□□ 0.43
LINC01238-205ENST00000567549 TSTA3Q13630 321 aaPredicted RBP17.75■□□□□ 0.43
LINC01238-205ENST00000567549 DSG2Q14126 1118 aa17.75■□□□□ 0.43
LINC01238-205ENST00000567549 GBX1Q14549 363 aa17.75■□□□□ 0.43
LINC01238-205ENST00000567549 INAQ16352 499 aa17.75■□□□□ 0.43
LINC01238-205ENST00000567549 CRB2Q5IJ48 1285 aa17.75■□□□□ 0.43
LINC01238-205ENST00000567549 CUZD1Q86UP6 607 aa17.75■□□□□ 0.43
LINC01238-205ENST00000567549 CILP2Q8IUL8 1156 aa17.75■□□□□ 0.43
LINC01238-205ENST00000567549 FBXO15Q8NCQ5 510 aaPredicted RBP17.75■□□□□ 0.43
LINC01238-205ENST00000567549 MCOLN3Q8TDD5 553 aa17.75■□□□□ 0.43
LINC01238-205ENST00000567549 C19orf60Q96EN9 201 aa17.75■□□□□ 0.43
LINC01238-205ENST00000567549 BARD1Q99728 777 aaKnown RBP17.75■□□□□ 0.43
LINC01238-205ENST00000567549 MKKSQ9NPJ1 570 aaPredicted RBP17.75■□□□□ 0.43
LINC01238-205ENST00000567549 RIC8BQ9NVN3 520 aa17.75■□□□□ 0.43
LINC01238-205ENST00000567549 DOCK10Q96BY6 2186 aa17.74■□□□□ 0.43
LINC01238-205ENST00000567549 PCSK5Q92824 1860 aa17.74■□□□□ 0.43
LINC01238-205ENST00000567549 IGLV3-12A0A075B6K2 115 aa17.74■□□□□ 0.43
LINC01238-205ENST00000567549 SDR42E2A6NKP2 422 aa17.74■□□□□ 0.43
LINC01238-205ENST00000567549 EIF3FO00303 357 aaPredicted RBP17.74■□□□□ 0.43
LINC01238-205ENST00000567549 NIPSNAP2O75323 286 aa17.74■□□□□ 0.43
LINC01238-205ENST00000567549 CYC1P08574 325 aa17.74■□□□□ 0.43
LINC01238-205ENST00000567549 EDN3P14138 238 aa17.74■□□□□ 0.43
LINC01238-205ENST00000567549 MAGEA6P43360 314 aa17.74■□□□□ 0.43
LINC01238-205ENST00000567549 PNLIPRP1P54315 467 aa17.74■□□□□ 0.43
LINC01238-205ENST00000567549 PRDX1Q06830 199 aaKnown RBP17.74■□□□□ 0.43
LINC01238-205ENST00000567549 GPS1Q13098 491 aa17.74■□□□□ 0.43
LINC01238-205ENST00000567549 DHX34Q14147 1143 aaKnown RBP17.74■□□□□ 0.43
LINC01238-205ENST00000567549 KLHL38Q2WGJ6 581 aa17.74■□□□□ 0.43
LINC01238-205ENST00000567549 THEMIS2Q5TEJ8 643 aa17.74■□□□□ 0.43
LINC01238-205ENST00000567549 FRMPD2BQ6IN97 320 aa17.74■□□□□ 0.43
LINC01238-205ENST00000567549 UGT3A1Q6NUS8 523 aa17.74■□□□□ 0.43
LINC01238-205ENST00000567549 RPUSD3Q6P087 351 aaKnown RBP17.74■□□□□ 0.43
LINC01238-205ENST00000567549 RIPOR1Q6ZS17 1223 aa17.74■□□□□ 0.43
LINC01238-205ENST00000567549 NDUFAF7Q7L592 441 aa17.74■□□□□ 0.43
LINC01238-205ENST00000567549 CSNK1A1LQ8N752 337 aa17.74■□□□□ 0.43
LINC01238-205ENST00000567549 KCNJ9Q92806 393 aa17.74■□□□□ 0.43
LINC01238-205ENST00000567549 ACAT2Q9BWD1 397 aa17.74■□□□□ 0.43
LINC01238-205ENST00000567549 YIPF2Q9BWQ6 316 aa17.74■□□□□ 0.43
LINC01238-205ENST00000567549 FAM129AQ9BZQ8 928 aa17.74■□□□□ 0.43
LINC01238-205ENST00000567549 TRPC4Q9UBN4 977 aa17.74■□□□□ 0.43
LINC01238-205ENST00000567549 A0A1W2PPV9 198 aa17.73■□□□□ 0.43
LINC01238-205ENST00000567549 PABPN1LA6NDY0 278 aaKnown RBP17.73■□□□□ 0.43
LINC01238-205ENST00000567549 LDLRP01130 860 aa17.73■□□□□ 0.43
LINC01238-205ENST00000567549 HEXBP07686 556 aa17.73■□□□□ 0.43
LINC01238-205ENST00000567549 MPC1LP0DKB6 136 aa17.73■□□□□ 0.43
LINC01238-205ENST00000567549 ARNTP27540 789 aa17.73■□□□□ 0.43
LINC01238-205ENST00000567549 AVPR1BP47901 424 aa17.73■□□□□ 0.43
LINC01238-205ENST00000567549 EMP2P54851 167 aa17.73■□□□□ 0.43
LINC01238-205ENST00000567549 ARG2P78540 354 aa17.73■□□□□ 0.43
LINC01238-205ENST00000567549 KCNJ11Q14654 390 aa17.73■□□□□ 0.43
LINC01238-205ENST00000567549 HIF1AQ16665 826 aa17.73■□□□□ 0.43
LINC01238-205ENST00000567549 PRTGQ2VWP7 1150 aa17.73■□□□□ 0.43
LINC01238-205ENST00000567549 ICE2Q659A1 982 aa17.73■□□□□ 0.43
LINC01238-205ENST00000567549 ZNF470Q6ECI4 717 aa17.73■□□□□ 0.43
LINC01238-205ENST00000567549 SHISA6Q6ZSJ9 500 aa17.73■□□□□ 0.43
LINC01238-205ENST00000567549 PALM2Q8IXS6 379 aa17.73■□□□□ 0.43
LINC01238-205ENST00000567549 METTL27Q8N6F8 245 aaPredicted RBP17.73■□□□□ 0.43
LINC01238-205ENST00000567549 BCORP1Q8N888 145 aa17.73■□□□□ 0.43
LINC01238-205ENST00000567549 SUN3Q8TAQ9 357 aa17.73■□□□□ 0.43
LINC01238-205ENST00000567549 GRK7Q8WTQ7 553 aa17.73■□□□□ 0.43
LINC01238-205ENST00000567549 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.73■□□□□ 0.43
LINC01238-205ENST00000567549 DRC3Q9H069 523 aa17.73■□□□□ 0.43
LINC01238-205ENST00000567549 PCBD2Q9H0N5 130 aa17.73■□□□□ 0.43
LINC01238-205ENST00000567549 TEKT2Q9UIF3 430 aa17.73■□□□□ 0.43
LINC01238-205ENST00000567549 RUVBL2Q9Y230 463 aaKnown RBP17.73■□□□□ 0.43
LINC01238-205ENST00000567549 CNTRLQ7Z7A1 2325 aa17.73■□□□□ 0.43
LINC01238-205ENST00000567549 LOC105369274A0A096LPK9 316 aa17.72■□□□□ 0.43
LINC01238-205ENST00000567549 LOC102723532A0A0G2JNH3 316 aa17.72■□□□□ 0.43
LINC01238-205ENST00000567549 WIPF3A6NGB9 483 aa17.72■□□□□ 0.43
LINC01238-205ENST00000567549 ARHGEF33A8MVX0 844 aa17.72■□□□□ 0.43
LINC01238-205ENST00000567549 H0YGG7 62 aa17.72■□□□□ 0.43
LINC01238-205ENST00000567549 WFS1O76024 890 aa17.72■□□□□ 0.43
LINC01238-205ENST00000567549 KCNJ1P48048 391 aa17.72■□□□□ 0.43
LINC01238-205ENST00000567549 ARF3P61204 181 aaPredicted RBP17.72■□□□□ 0.43
LINC01238-205ENST00000567549 FAM53BQ14153 422 aa17.72■□□□□ 0.43
LINC01238-205ENST00000567549 CCSMST1Q4G0I0 132 aa17.72■□□□□ 0.43
LINC01238-205ENST00000567549 CES3Q6UWW8 571 aa17.72■□□□□ 0.43
LINC01238-205ENST00000567549 ADCK2Q7Z695 626 aa17.72■□□□□ 0.43
LINC01238-205ENST00000567549 OR4N4Q8N0Y3 316 aa17.72■□□□□ 0.43
LINC01238-205ENST00000567549 MCUQ8NE86 351 aa17.72■□□□□ 0.43
LINC01238-205ENST00000567549 FAR1Q8WVX9 515 aa17.72■□□□□ 0.43
LINC01238-205ENST00000567549 METTL21AQ8WXB1 218 aa17.72■□□□□ 0.43
LINC01238-205ENST00000567549 ZNF669Q96BR6 464 aaPredicted RBP17.72■□□□□ 0.43
LINC01238-205ENST00000567549 MMABQ96EY8 250 aaPredicted RBP17.72■□□□□ 0.43
LINC01238-205ENST00000567549 FAM167BQ9BTA0 163 aa17.72■□□□□ 0.43
LINC01238-205ENST00000567549 TGIF2Q9GZN2 237 aa17.72■□□□□ 0.43
LINC01238-205ENST00000567549 ZNF160Q9HCG1 818 aa17.72■□□□□ 0.43
LINC01238-205ENST00000567549 TAC3Q9UHF0 121 aa17.72■□□□□ 0.43
LINC01238-205ENST00000567549 TSR3Q9UJK0 312 aaKnown RBP17.72■□□□□ 0.43
LINC01238-205ENST00000567549 ERRFI1Q9UJM3 462 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 252.6 ms