RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 TMEM17Q86X19 198 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 SPATA22Q8NHS9 363 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CITED4Q96RK1 184 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 LGR4Q9BXB1 951 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 ANKRD60Q9BZ19 345 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 UCK2Q9BZX2 261 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 GPR88Q9GZN0 384 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 C12orf65Q9H3J6 166 aaKnown RBP4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 TCF7L1Q9HCS4 588 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 DAPL1A0PJW8 107 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 TBC1D3BA6NDS4 549 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CXorf49A8MYA2 514 aaPredicted RBP4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 ISM1B1AKI9 464 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 ALPPP05187 535 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 HOXD8P13378 290 aaPredicted RBP4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CYBAP13498 195 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CTSEP14091 401 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 ATP5A1P25705 553 aaKnown RBP4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 STOMP27105 288 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CST5P28325 142 aaPredicted RBP4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 MPIP34949 423 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 NOVP48745 357 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 DCDC1P59894 354 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 NFKB2Q00653 900 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 ST3GAL3Q11203 375 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 SOWAHAQ2M3V2 549 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 BRAT1Q6PJG6 821 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 KBTBD6Q86V97 674 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CILP2Q8IUL8 1156 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 SETD6Q8TBK2 473 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 SHDQ96IW2 340 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 METTL2AQ96IZ6 378 aaKnown RBP4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 FERD3LQ96RJ6 166 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 ZSCAN5AQ9BUG6 496 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CD93Q9NPY3 652 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 COL20A1Q9P218 1284 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 FKBPLQ9UIM3 349 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 IFT52Q9Y366 437 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 TESMINQ9Y4I5 508 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 ASB4Q9Y574 426 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 COL24A1Q17RW2 1714 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 ARFGEF1Q9Y6D6 1849 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 MCIDASD6RGH6 385 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 PCDH7O60245 1069 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 UBXN7O94888 489 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 SNX4O95219 450 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 MT-CYBP00156 380 aaPredicted RBP4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CHRNA1P02708 482 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 PIRTP0C851 137 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 ITPKAP23677 461 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 DDX6P26196 483 aaKnown RBP eCLIP4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 PTGS2P35354 604 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 GRK6P43250 576 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 MAGEA2P43356 314 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 DGKGP49619 791 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 PPP5CP53041 499 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 MTPNP58546 118 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 ADAM8P78325 824 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CLDN10P78369 228 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 GAS6Q14393 721 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 PTGR1Q14914 329 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CRB2Q5IJ48 1285 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 PRAMEF19Q5SWL8 479 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 OLFML2AQ68BL7 652 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 PYHIN1Q6K0P9 492 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 FAM171BQ6P995 826 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 TLDC1Q6P9B6 456 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 C15orf39Q6ZRI6 1047 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 ZNF767PQ75MW2 155 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 TOMM5Q8N4H5 51 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 ATAD1Q8NBU5 361 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 PSD4Q8NDX1 1056 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 OR56A1Q8NGH5 318 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CEP76Q8TAP6 659 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 DNAJA4Q8WW22 397 aaPredicted RBP4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 TRIB2Q92519 343 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 COL26A1Q96A83 441 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CPNE2Q96FN4 548 aaPredicted RBP4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CDCA3Q99618 268 aaPredicted RBP4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 MCMBPQ9BTE3 642 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 ZNF358Q9NW07 568 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 TMEM248Q9NWD8 314 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 SPEF1Q9Y4P9 236 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 KANTRA0A1W2PQU2 76 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 YJEFN3A6XGL0 299 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 MANBAO00462 879 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SDHDO14521 159 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 DNTTP04053 509 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 IL3P08700 152 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 NCK1P16333 377 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 ZNF182P17025 639 aaPredicted RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 CSNK2A2P19784 350 aaPredicted RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 ENDOUP21128 410 aaKnown RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 HRH2P25021 359 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 CD52P31358 61 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 PLA2G4EQ3MJ16 856 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 ATAT1Q5SQI0 421 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 PLEKHS1Q5SXH7 462 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 LIPJQ5W064 366 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms