RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 ALOX12BO75342 701 aa14.28□□□□□ -0.12
RNF40-209ENST00000566703 CLDN1O95832 211 aa14.28□□□□□ -0.12
RNF40-209ENST00000566703 FBLP22087 321 aaKnown RBP14.28□□□□□ -0.12
RNF40-209ENST00000566703 CXCR2P25025 360 aa14.28□□□□□ -0.12
RNF40-209ENST00000566703 RPA3P35244 121 aaPredicted RBP14.28□□□□□ -0.12
RNF40-209ENST00000566703 ABATP80404 500 aa14.28□□□□□ -0.12
RNF40-209ENST00000566703 CDC16Q13042 620 aa14.28□□□□□ -0.12
RNF40-209ENST00000566703 DSG2Q14126 1118 aa14.28□□□□□ -0.12
RNF40-209ENST00000566703 KLHL38Q2WGJ6 581 aa14.28□□□□□ -0.12
RNF40-209ENST00000566703 TTLL9Q3SXZ7 439 aa14.28□□□□□ -0.12
RNF40-209ENST00000566703 ACSBG2Q5FVE4 666 aa14.28□□□□□ -0.12
RNF40-209ENST00000566703 ZNF425Q6IV72 752 aa14.28□□□□□ -0.12
RNF40-209ENST00000566703 CES3Q6UWW8 571 aa14.28□□□□□ -0.12
RNF40-209ENST00000566703 CENPUQ71F23 418 aa14.28□□□□□ -0.12
RNF40-209ENST00000566703 NDUFAF7Q7L592 441 aa14.28□□□□□ -0.12
RNF40-209ENST00000566703 PAQR7Q86WK9 346 aa14.28□□□□□ -0.12
RNF40-209ENST00000566703 CILP2Q8IUL8 1156 aa14.28□□□□□ -0.12
RNF40-209ENST00000566703 KBTBD2Q8IY47 623 aa14.28□□□□□ -0.12
RNF40-209ENST00000566703 CABS1Q96KC9 395 aa14.28□□□□□ -0.12
RNF40-209ENST00000566703 C10orf90Q96M02 699 aa14.28□□□□□ -0.12
RNF40-209ENST00000566703 TRIM56Q9BRZ2 755 aaKnown RBP14.28□□□□□ -0.12
RNF40-209ENST00000566703 ACAT2Q9BWD1 397 aa14.28□□□□□ -0.12
RNF40-209ENST00000566703 TGIF2Q9GZN2 237 aa14.28□□□□□ -0.12
RNF40-209ENST00000566703 C14orf105Q9NVL8 296 aa14.28□□□□□ -0.12
RNF40-209ENST00000566703 PCM1Q15154 2024 aa14.27□□□□□ -0.12
RNF40-209ENST00000566703 NSG1A0A0A6YYJ2 146 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 TCRBV7S3A2A0A539 114 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 GOLGA8KD6RF30 607 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 E5RI56 91 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 GOLGA8TH3BQL2 631 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 KLHL18O94889 574 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 MLNP12872 115 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 SLC26A3P40879 764 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 PNLIPRP1P54315 467 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 PER3P56645 1201 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 AP2B1P63010 937 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 YBX1P67809 324 aaKnown RBP14.27□□□□□ -0.13
RNF40-209ENST00000566703 FAM53BQ14153 422 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 VWA2Q5GFL6 755 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.27□□□□□ -0.13
RNF40-209ENST00000566703 RIPOR1Q6ZS17 1223 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 LAPTM4BQ86VI4 370 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 DTWD1Q8N5C7 304 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 CSNK1A1LQ8N752 337 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 TRIM58Q8NG06 486 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 PSMF1Q92530 271 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 HAS2Q92819 552 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 OR2A5Q96R48 311 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 PKP4Q99569 1192 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 EBNA1BP2Q99848 306 aaKnown RBP14.27□□□□□ -0.13
RNF40-209ENST00000566703 ZNF160Q9HCG1 818 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 MKKSQ9NPJ1 570 aaPredicted RBP14.27□□□□□ -0.13
RNF40-209ENST00000566703 GALPQ9UBC7 116 aa14.27□□□□□ -0.13
RNF40-209ENST00000566703 SPTBN1Q01082 2364 aaKnown RBP14.26□□□□□ -0.13
RNF40-209ENST00000566703 LOC102723996A0A087X1L8 192 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 IGKV1-8A0A0C4DH67 115 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 FAM237BA0A1B0GVD1 139 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 KRT87PA6NCN2 255 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 SDR42E2A6NKP2 422 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 IDSB3KWA1 339 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 E2F3O00716 465 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 CEP104O60308 925 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 NRP2O60462 931 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 BMP10O95393 424 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 SERPINA7P05543 415 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 CCDC175P0C221 793 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 MPC1LP0DKB6 136 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 ICAM2P13598 275 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 ENO3P13929 434 aaPredicted RBP14.26□□□□□ -0.13
RNF40-209ENST00000566703 EZRP15311 586 aaKnown RBP14.26□□□□□ -0.13
RNF40-209ENST00000566703 DCTP40126 519 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 CLCN7P51798 805 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 KCNJ11Q14654 390 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 ICE2Q659A1 982 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 FAM180AQ6UWF9 173 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 SUSD1Q6UWL2 747 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 LINC00696Q6ZRV3 163 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 CAND1Q86VP6 1230 aaKnown RBP14.26□□□□□ -0.13
RNF40-209ENST00000566703 REXO1L1PQ8IX06 675 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 LMNTD2Q8IXW0 634 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 SLC34A3Q8N130 599 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 ARHGEF39Q8N4T4 335 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 BCORP1Q8N888 145 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 PRELID2Q8N945 189 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 CATSPER1Q8NEC5 780 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 ASB11Q8WXH4 323 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 RERGQ96A58 199 aaPredicted RBP14.26□□□□□ -0.13
RNF40-209ENST00000566703 CNDP1Q96KN2 507 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 SAMD15Q9P1V8 674 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 STOX2Q9P2F5 926 aaPredicted RBP14.26□□□□□ -0.13
RNF40-209ENST00000566703 TRPC4Q9UBN4 977 aa14.26□□□□□ -0.13
RNF40-209ENST00000566703 RUVBL1Q9Y265 456 aaKnown RBP14.26□□□□□ -0.13
RNF40-209ENST00000566703 IGHV1-45A0A0A0MS14 117 aa14.25□□□□□ -0.13
RNF40-209ENST00000566703 A0A1B0GUH1 482 aa14.25□□□□□ -0.13
RNF40-209ENST00000566703 DYTNA2CJ06 578 aa14.25□□□□□ -0.13
RNF40-209ENST00000566703 E7ENX8 843 aa14.25□□□□□ -0.13
RNF40-209ENST00000566703 GFYI3L273 518 aa14.25□□□□□ -0.13
RNF40-209ENST00000566703 ZBTB14O43829 449 aa14.25□□□□□ -0.13
RNF40-209ENST00000566703 SLC16A8O95907 504 aa14.25□□□□□ -0.13
RNF40-209ENST00000566703 CYC1P08574 325 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms