RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 NEMP2A6NFY4 417 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 NCF1BA6NI72 391 aaPredicted RBP3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 SLC15A5A6NIM6 579 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 TMEM200CA6NKL6 621 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 NCF1CA8MVU1 366 aaPredicted RBP3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 BTBD19C9JJ37 291 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 UBE2Q2LH0YL09 131 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 H3BMM5 538 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 STMND1H3BQB6 276 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 SPINT2O43291 252 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 MED7O43513 233 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 ZNF821O75541 412 aaPredicted RBP3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 RHOBTB1O94844 696 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 MOCS2O96007 188 aaPredicted RBP3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 IL1BP01584 269 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 WNT1P04628 370 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 KRT8P05787 483 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 LCKP06239 509 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 CA3P07451 260 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 ASNSP08243 561 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 MYZAPP0CAP1 466 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 DLATP10515 647 aaKnown RBP3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 TNNI3P19429 210 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 GALP22466 123 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 NR4A1P22736 598 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 JAK1P23458 1154 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 PTPN4P29074 926 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 PTPN6P29350 595 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 BDKRB2P30411 391 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 GRIA3P42263 894 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 OR3A1P47881 315 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 PPP3CCP48454 512 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 NR0B1P51843 470 aaKnown RBP3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 PRRX1P54821 245 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 TAS2R38P59533 333 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 ACTR3P61158 418 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 SLC34A1Q06495 639 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 CRYZQ08257 329 aaKnown RBP3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 DSC1Q08554 894 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 GK2Q14410 553 aaPredicted RBP3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 EFTUD2Q15029 972 aaKnown RBP eCLIP3.17□□□□□ -1.96e-17■■■■■ 31.3
HERPUD1-211ENST00000566550 LSM12Q3MHD2 195 aaKnown RBP3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 FAM153CQ494X1 144 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 MIS18BP1Q6P0N0 1132 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 TMEM71Q6P5X7 295 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 SHFQ7M4L6 423 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 ADGRD2Q7Z7M1 963 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 NBPF5PQ86XG9 351 aaPredicted RBP3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 PALB2Q86YC2 1186 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 GRAMD2AQ8IUY3 354 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 LAX1Q8IWV1 398 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 PHC2Q8IXK0 858 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 TTC5Q8N0Z6 440 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 LCORLQ8N3X6 602 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 RYBPQ8N488 228 aaPredicted RBP3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 PDCL2Q8N4E4 241 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 SLC5A8Q8N695 610 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 PCDH20Q8N6Y1 951 aaKnown RBP3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 FADS6Q8N9I5 356 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 PAPD5Q8NDF8 572 aaKnown RBP3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 ACVR1CQ8NER5 493 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 TRIM58Q8NG06 486 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 OR8J1Q8NGP2 316 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 PPP4R1Q8TF05 950 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 ADAMTS14Q8WXS8 1223 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 GGHQ92820 318 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 WBP2Q969T9 261 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 EME1Q96AY2 570 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 RHBDF1Q96CC6 855 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 RASL10BQ96S79 203 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 PLIN2Q99541 437 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 C17orf62Q9BQA9 187 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 JPH2Q9BR39 696 aaPredicted RBP3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 CDK19Q9BWU1 502 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 NFKBIZQ9BYH8 718 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 B3GNT4Q9C0J1 378 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 KCNN2Q9H2S1 579 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 SLA2Q9H6Q3 261 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 RPAP3Q9H6T3 665 aaPredicted RBP3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 TRPC7Q9HCX4 862 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 PHPT1Q9NRX4 125 aaPredicted RBP3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 FAM114A2Q9NRY5 505 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 GAR1Q9NY12 217 aaKnown RBP3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 RDH8Q9NYR8 311 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 PTTG2Q9NZH5 202 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 NPAP1Q9NZP6 1156 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 C6orf203Q9P0P8 240 aaPredicted RBP3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 FBXL2Q9UKC9 423 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 ACSL5Q9ULC5 683 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 MRPS7Q9Y2R9 242 aaKnown RBP3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 SCRIBQ14160 1630 aa3.17□□□□□ -1.9
HERPUD1-211ENST00000566550 NCAPD3P42695 1498 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 GAPVD1Q14C86 1478 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 SNAPC4Q5SXM2 1469 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 PCSK5Q92824 1860 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 HEG1Q9ULI3 1381 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 A0A0U1RQV5 110 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 CENPVL1A0A0U1RR11 272 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 A0A1W2PPK0 400 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms