RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 NEIL2Q969S2 332 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 SLC22A18Q96BI1 424 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 ARL8AQ96BM9 186 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 GRAMD1AQ96CP6 724 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 SCYL1Q96KG9 808 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 TSNARE1Q96NA8 513 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 TMEM237Q96Q45 408 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 SCNM1Q9BWG6 230 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 C1QTNF3Q9BXJ4 246 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 CD244Q9BZW8 370 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 CHRNA10Q9GZZ6 450 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 SPNS1Q9H2V7 528 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 FAM60AQ9NP50 221 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 SSU72Q9NP77 194 aaKnown RBP7.85□□□□□ -1.15
CDH13-208ENST00000566333 OCIAD1Q9NX40 245 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 ANKMY1Q9P2S6 941 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 DCDC2Q9UHG0 476 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 PILRAQ9UKJ1 303 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 PCTPQ9UKL6 214 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 SATB2Q9UPW6 733 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 SLC22A14Q9Y267 594 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 LOXL2Q9Y4K0 774 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 ACTL7BQ9Y614 415 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 LAMA5O15230 3695 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 LOC400499M0QZD8 3231 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 ITPR1Q14643 2758 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 PTPRQQ9UMZ3 2332 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 EFCAB7A8K855 629 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 E7EQ34 232 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 STX16-NPEPL1H3BU86 382 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 E2F3O00716 465 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 STX16O14662 325 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 HAT1O14929 419 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 PLD2O14939 933 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 CCNDBP1O95273 360 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 S100BP04271 92 aaPredicted RBP7.84□□□□□ -1.15
CDH13-208ENST00000566333 FGF3P11487 239 aaPredicted RBP7.84□□□□□ -1.15
CDH13-208ENST00000566333 GFAPP14136 432 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 JUPP14923 745 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 CD22P20273 847 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 ATP5F1P24539 256 aaPredicted RBP7.84□□□□□ -1.15
CDH13-208ENST00000566333 EEF1DP29692 281 aaKnown RBP7.84□□□□□ -1.15
CDH13-208ENST00000566333 CMPK1P30085 196 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 MLLT3P42568 568 aaPredicted RBP7.84□□□□□ -1.15
CDH13-208ENST00000566333 HSD11B2P80365 405 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 ABATP80404 500 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 SHC2P98077 582 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 REEP5Q00765 189 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 CDC16Q13042 620 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 EIF3IQ13347 325 aaKnown RBP7.84□□□□□ -1.15
CDH13-208ENST00000566333 MPP2Q14168 576 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 PCBP2Q15366 365 aaKnown RBP eCLIP7.84□□□□□ -1.15
CDH13-208ENST00000566333 SF1Q15637 639 aaKnown RBP7.84□□□□□ -1.15
CDH13-208ENST00000566333 GPR19Q15760 415 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 PDK4Q16654 411 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 CCDC153Q494R4 210 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 CATSPEREQ5SY80 951 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 THEMIS2Q5TEJ8 643 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 FAM219BQ5XKK7 198 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 RPS27LQ71UM5 84 aaKnown RBP7.84□□□□□ -1.15
CDH13-208ENST00000566333 RAB11FIP2Q7L804 512 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 TMPRSS11BQ86T26 416 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 C17orf64Q86WR6 236 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 FAM129CQ86XR2 697 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 DNAJC22Q8N4W6 341 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 AGBL5Q8NDL9 886 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 ABHD11Q8NFV4 315 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 WDR36Q8NI36 951 aaKnown RBP7.84□□□□□ -1.15
CDH13-208ENST00000566333 TCP10LQ8TDR4 215 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 ALKBH8Q96BT7 664 aaKnown RBP7.84□□□□□ -1.15
CDH13-208ENST00000566333 PHF21BQ96EK2 531 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 ZNF285Q96NJ3 590 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 NSUN5Q96P11 429 aaKnown RBP7.84□□□□□ -1.15
CDH13-208ENST00000566333 FCRL4Q96PJ5 515 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 FAM111AQ96PZ2 611 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 SMC6Q96SB8 1091 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 RUFY1Q96T51 708 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 PLCD4Q9BRC7 762 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 DPH7Q9BTV6 452 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 TMEM121BQ9BXQ6 578 aaPredicted RBP7.84□□□□□ -1.15
CDH13-208ENST00000566333 STRADBQ9C0K7 418 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 PCBD2Q9H0N5 130 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 CENPHQ9H3R5 247 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 CNOT10Q9H9A5 744 aaKnown RBP7.84□□□□□ -1.15
CDH13-208ENST00000566333 ZBTB26Q9HCK0 441 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 APMAPQ9HDC9 416 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 MRPS30Q9NP92 439 aaKnown RBP7.84□□□□□ -1.15
CDH13-208ENST00000566333 ASCL3Q9NQ33 180 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 ACSS2Q9NR19 701 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 ABCF3Q9NUQ8 709 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 DNAJC11Q9NVH1 559 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 SOHLH2Q9NX45 425 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 COPG2Q9UBF2 871 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 GRID1Q9ULK0 1009 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 TMCO1Q9UM00 188 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 PLLPQ9Y342 182 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 NEUROG3Q9Y4Z2 214 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 EPG5Q9HCE0 2579 aa7.84□□□□□ -1.15
CDH13-208ENST00000566333 SCN2AQ99250 2005 aa7.83□□□□□ -1.16
CDH13-208ENST00000566333 A0A1B0GTL3 188 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms