RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 TUBGCP3Q96CW5 907 aa18.07■□□□□ 0.48
COMMD4-213ENST00000565834 FRG2BQ96QU4 278 aa18.07■□□□□ 0.48
COMMD4-213ENST00000565834 HBEGFQ99075 208 aa18.07■□□□□ 0.48
COMMD4-213ENST00000565834 COL25A1Q9BXS0 654 aaPredicted RBP18.07■□□□□ 0.48
COMMD4-213ENST00000565834 PELI2Q9HAT8 420 aa18.07■□□□□ 0.48
COMMD4-213ENST00000565834 FSCN3Q9NQT6 498 aa18.07■□□□□ 0.48
COMMD4-213ENST00000565834 FARSBQ9NSD9 589 aaKnown RBP18.07■□□□□ 0.48
COMMD4-213ENST00000565834 RIC8BQ9NVN3 520 aa18.07■□□□□ 0.48
COMMD4-213ENST00000565834 ZFP69BQ9UJL9 534 aa18.07■□□□□ 0.48
COMMD4-213ENST00000565834 TRIM33Q9UPN9 1127 aa18.07■□□□□ 0.48
COMMD4-213ENST00000565834 A0A1B0GTQ1 180 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 ERICH4A6NGS2 130 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 CCT8L1PA6NM43 557 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 ISM1B1AKI9 464 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 H0YIV9 168 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 BTN3A3O00478 584 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 FCHO1O14526 889 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 DFNA5O60443 496 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 CCNDBP1O95273 360 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 SERPINA6P08185 405 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 EPHA8P29322 1005 aaPredicted RBP18.06■□□□□ 0.48
COMMD4-213ENST00000565834 PRDX1Q06830 199 aaKnown RBP18.06■□□□□ 0.48
COMMD4-213ENST00000565834 KIR2DS3Q14952 304 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 HIST2H2ACQ16777 129 aaPredicted RBP18.06■□□□□ 0.48
COMMD4-213ENST00000565834 TRIM61Q5EBN2 209 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.06■□□□□ 0.48
COMMD4-213ENST00000565834 HIST2H2AA3Q6FI13 130 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 SLC23A3Q6PIS1 610 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 LARP4Q71RC2 724 aaKnown RBP eCLIP18.06■□□□□ 0.485e-6■■■■□ 20
COMMD4-213ENST00000565834 SLC25A45Q8N413 288 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 FITM2Q8N6M3 262 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 SLC22A18Q96BI1 424 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 REPS1Q96D71 796 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 ERP27Q96DN0 273 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 NMUR2Q9GZQ4 415 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 AKTIPQ9H8T0 292 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 CUEDC1Q9NWM3 386 aaPredicted RBP18.06■□□□□ 0.48
COMMD4-213ENST00000565834 GEMIN8Q9NWZ8 242 aaKnown RBP18.06■□□□□ 0.48
COMMD4-213ENST00000565834 SLC6A14Q9UN76 642 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 PCDHGA11Q9Y5H2 935 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 PCDH15Q96QU1 1955 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 DNAH14Q0VDD8 3507 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 PIPSLA2A3N6 862 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 OR6C74A6NCV1 312 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 PATE3B3GLJ2 98 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 SLC28A1O00337 649 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 YKT6O15498 198 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 PDYNP01213 254 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 NCF2P19878 526 aaPredicted RBP18.06■□□□□ 0.48
COMMD4-213ENST00000565834 CCR8P51685 355 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 YBX1P67809 324 aaKnown RBP18.06■□□□□ 0.48
COMMD4-213ENST00000565834 ABATP80404 500 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 SF1Q15637 639 aaKnown RBP18.06■□□□□ 0.48
COMMD4-213ENST00000565834 C14orf28Q4W4Y0 310 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 SPDYAQ5MJ70 313 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 C6orf132Q5T0Z8 1188 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 MED27Q6P2C8 311 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 ZNF771Q7L3S4 317 aaPredicted RBP18.06■□□□□ 0.48
COMMD4-213ENST00000565834 C17orf82Q86X59 251 aaPredicted RBP18.06■□□□□ 0.48
COMMD4-213ENST00000565834 ZNF761Q86XN6 746 aaPredicted RBP18.06■□□□□ 0.48
COMMD4-213ENST00000565834 KRT78Q8N1N4 520 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 GPR156Q8NFN8 814 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 ABHD11Q8NFV4 315 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 OR10G6Q8NH81 332 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 MTFMTQ96DP5 389 aaKnown RBP18.06■□□□□ 0.48
COMMD4-213ENST00000565834 LOXL4Q96JB6 756 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 MYLK2Q9H1R3 596 aa18.06■□□□□ 0.48
COMMD4-213ENST00000565834 MRPS30Q9NP92 439 aaKnown RBP18.06■□□□□ 0.48
COMMD4-213ENST00000565834 ARID1BQ8NFD5 2236 aaPredicted RBP18.05■□□□□ 0.48
COMMD4-213ENST00000565834 RGS14O43566 566 aa18.05■□□□□ 0.48
COMMD4-213ENST00000565834 EPN2O95208 641 aa18.05■□□□□ 0.48
COMMD4-213ENST00000565834 CMPK1P30085 196 aa18.05■□□□□ 0.48
COMMD4-213ENST00000565834 NEK2P51955 445 aa18.05■□□□□ 0.48
COMMD4-213ENST00000565834 MEF2AQ02078 507 aaPredicted RBP18.05■□□□□ 0.48
COMMD4-213ENST00000565834 ZNF33BQ06732 778 aa18.05■□□□□ 0.48
COMMD4-213ENST00000565834 IMPG1Q17R60 797 aa18.05■□□□□ 0.48
COMMD4-213ENST00000565834 ZC3H14Q6PJT7 736 aaKnown RBP18.05■□□□□ 0.48
COMMD4-213ENST00000565834 TRIM46Q7Z4K8 759 aa18.05■□□□□ 0.48
COMMD4-213ENST00000565834 CLNKQ7Z7G1 428 aa18.05■□□□□ 0.48
COMMD4-213ENST00000565834 KYQ8NBH2 561 aa18.05■□□□□ 0.48
COMMD4-213ENST00000565834 OR2L3Q8NG85 312 aa18.05■□□□□ 0.48
COMMD4-213ENST00000565834 OR2T11Q8NH01 316 aa18.05■□□□□ 0.48
COMMD4-213ENST00000565834 WDR20Q8TBZ3 569 aa18.05■□□□□ 0.48
COMMD4-213ENST00000565834 UBE2E3Q969T4 207 aa18.05■□□□□ 0.48
COMMD4-213ENST00000565834 AIF1LQ9BQI0 150 aa18.05■□□□□ 0.48
COMMD4-213ENST00000565834 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.05■□□□□ 0.48
COMMD4-213ENST00000565834 TWSG1Q9GZX9 223 aa18.05■□□□□ 0.48
COMMD4-213ENST00000565834 GAREM1Q9H706 876 aa18.05■□□□□ 0.48
COMMD4-213ENST00000565834 UCK1Q9HA47 277 aa18.05■□□□□ 0.48
COMMD4-213ENST00000565834 RAB23Q9ULC3 237 aa18.05■□□□□ 0.48
COMMD4-213ENST00000565834 R4GN57 208 aa18.05■□□□□ 0.48
COMMD4-213ENST00000565834 GSAPA4D1B5 854 aa18.04■□□□□ 0.48
COMMD4-213ENST00000565834 H7BY64 318 aa18.04■□□□□ 0.48
COMMD4-213ENST00000565834 PPM1DO15297 605 aa18.04■□□□□ 0.48
COMMD4-213ENST00000565834 CER1O95813 267 aa18.04■□□□□ 0.48
COMMD4-213ENST00000565834 PCNAP12004 261 aa18.04■□□□□ 0.48
COMMD4-213ENST00000565834 LBPP18428 481 aa18.04■□□□□ 0.48
COMMD4-213ENST00000565834 POLR2CP19387 275 aaPredicted RBP18.04■□□□□ 0.48
COMMD4-213ENST00000565834 CXCR2P25025 360 aa18.04■□□□□ 0.48
COMMD4-213ENST00000565834 NR6A1Q15406 480 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms