RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 RNF44Q7L0R7 432 aa17.56■□□□□ 0.4
SYNGR3-204ENST00000564642 ADCK2Q7Z695 626 aa17.56■□□□□ 0.4
SYNGR3-204ENST00000564642 ZC3HC1Q86WB0 502 aaKnown RBP17.56■□□□□ 0.4
SYNGR3-204ENST00000564642 APLFQ8IW19 511 aaPredicted RBP17.56■□□□□ 0.4
SYNGR3-204ENST00000564642 ABHD17AQ96GS6 310 aa17.56■□□□□ 0.4
SYNGR3-204ENST00000564642 ZNF285Q96NJ3 590 aa17.56■□□□□ 0.4
SYNGR3-204ENST00000564642 OLFM1Q99784 485 aa17.56■□□□□ 0.4
SYNGR3-204ENST00000564642 CCDC177Q9NQR7 707 aaPredicted RBP17.56■□□□□ 0.4
SYNGR3-204ENST00000564642 STOX2Q9P2F5 926 aaPredicted RBP17.56■□□□□ 0.4
SYNGR3-204ENST00000564642 TXNDC16Q9P2K2 825 aa17.56■□□□□ 0.4
SYNGR3-204ENST00000564642 KALRNO60229 2985 aa17.56■□□□□ 0.4
SYNGR3-204ENST00000564642 LOC105369274A0A096LPK9 316 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 LOC102723532A0A0G2JNH3 316 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 FAM95CA0A1B0GW59 222 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 HYKKA2RU49 373 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 FITM1A5D6W6 292 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 DSCR3O14972 297 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 NRP2O60462 931 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 RFPL1O75677 317 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 FOLR3P41439 243 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 GCGRP47871 477 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 PGGT1BP53609 377 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 PMS2P54278 862 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 ILF2Q12905 390 aaKnown RBP17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 SSPNQ14714 243 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 C8orf74Q6P047 294 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 C3orf62Q6ZUJ4 267 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 PAQR7Q86WK9 346 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 CCDC25Q86WR0 208 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 RAB43Q86YS6 212 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 LRRC56Q8IYG6 542 aaPredicted RBP17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 OR4N4Q8N0Y3 316 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 ADAMTS17Q8TE56 1095 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 RERGQ96A58 199 aaPredicted RBP17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 ALKBH8Q96BT7 664 aaKnown RBP17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 PCBD2Q9H0N5 130 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 ZNF71Q9NQZ8 489 aaPredicted RBP17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 ACSS2Q9NR19 701 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 ENAMQ9NRM1 1142 aa17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 PTRH2Q9Y3E5 179 aaKnown RBP17.55■□□□□ 0.4
SYNGR3-204ENST00000564642 MDC1Q14676 2089 aaKnown RBP17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 TENM4Q6N022 2769 aa17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 COL6A6A6NMZ7 2263 aa17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 IGKV1-8A0A0C4DH67 115 aa17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 ARGFXA6NJG6 315 aa17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 H0YGG7 62 aa17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 KLF7O75840 302 aaPredicted RBP17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 TSPAN12O95859 305 aa17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 GSTA2P09210 222 aa17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 ARF3P61204 181 aaPredicted RBP17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 SLC7A5Q01650 507 aa17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 WHAMMP3Q1A5X7 153 aa17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 PRAMEF13Q5VWM6 474 aa17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 ZNF425Q6IV72 752 aa17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 AGTRAPQ6RW13 159 aa17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 PRICKLE2Q7Z3G6 844 aa17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 NKAPQ8N5F7 415 aaKnown RBP17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 FBXO25Q8TCJ0 367 aa17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 VPS39Q96JC1 886 aa17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 ATG10Q9H0Y0 220 aa17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 ING2Q9H160 280 aa17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 RHOJQ9H4E5 214 aa17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 ARL15Q9NXU5 204 aa17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 TLK1Q9UKI8 766 aa17.54■□□□□ 0.4
SYNGR3-204ENST00000564642 H7BY64 318 aa17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 EZRP15311 586 aaKnown RBP17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 CCND1P24385 295 aa17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 HRH2P25021 359 aa17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 OTX2P32243 289 aa17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 SLC12A2P55011 1212 aa17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 AP1S2P56377 157 aa17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 TBPL1P62380 186 aa17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 RELAQ04206 551 aa17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 NAE1Q13564 534 aa17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 PHKG1Q16816 387 aa17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 MUM1Q2TAK8 710 aa17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 LACTB2Q53H82 288 aaPredicted RBP17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 MRPL14Q6P1L8 145 aaKnown RBP17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 MBOAT1Q6ZNC8 495 aa17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 CYS1Q717R9 158 aa17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 OVCH1Q7RTY7 1134 aa17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 PTRH1Q86Y79 214 aaKnown RBP17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 OR2Y1Q8NGV0 311 aa17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 PTERQ96BW5 349 aa17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 PDLIM5Q96HC4 596 aaKnown RBP17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 CABS1Q96KC9 395 aa17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 PRAP1Q96NZ9 151 aa17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 LRRC1Q9BTT6 524 aa17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 PHACTR1Q9C0D0 580 aa17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 SMYD2Q9NRG4 433 aa17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 TMEM184CQ9NVA4 438 aa17.53■□□□□ 0.4
SYNGR3-204ENST00000564642 CFAP46Q8IYW2 2715 aa17.52■□□□□ 0.4
SYNGR3-204ENST00000564642 TXNDC9O14530 226 aa17.52■□□□□ 0.4
SYNGR3-204ENST00000564642 SLC28A2O43868 658 aa17.52■□□□□ 0.4
SYNGR3-204ENST00000564642 PIAS1O75925 651 aa17.52■□□□□ 0.4
SYNGR3-204ENST00000564642 DNAJB5O75953 348 aa17.52■□□□□ 0.4
SYNGR3-204ENST00000564642 ALBP02768 609 aa17.52■□□□□ 0.4
SYNGR3-204ENST00000564642 TUBB4AP04350 444 aa17.52■□□□□ 0.4
SYNGR3-204ENST00000564642 ENO2P09104 434 aaPredicted RBP17.52■□□□□ 0.4
SYNGR3-204ENST00000564642 PLA2G2AP14555 144 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms