RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 NR4A3Q92570 626 aa19.9■□□□□ 0.78
HERC2-204ENST00000563945 HAS2Q92819 552 aa19.9■□□□□ 0.78
HERC2-204ENST00000563945 RERGQ96A58 199 aaPredicted RBP19.9■□□□□ 0.78
HERC2-204ENST00000563945 MMABQ96EY8 250 aaPredicted RBP19.9■□□□□ 0.78
HERC2-204ENST00000563945 HES6Q96HZ4 224 aa19.9■□□□□ 0.78
HERC2-204ENST00000563945 BAG1Q99933 345 aaPredicted RBP19.9■□□□□ 0.78
HERC2-204ENST00000563945 P2RY12Q9H244 342 aa19.9■□□□□ 0.78
HERC2-204ENST00000563945 MRPS30Q9NP92 439 aaKnown RBP19.9■□□□□ 0.78
HERC2-204ENST00000563945 C14orf105Q9NVL8 296 aa19.9■□□□□ 0.78
HERC2-204ENST00000563945 RUVBL2Q9Y230 463 aaKnown RBP19.9■□□□□ 0.78
HERC2-204ENST00000563945 LRBAP50851 2863 aa19.9■□□□□ 0.78
HERC2-204ENST00000563945 TRGV8A0A0C4DH27 118 aa19.89■□□□□ 0.77
HERC2-204ENST00000563945 OR2A25A4D2G3 310 aa19.89■□□□□ 0.77
HERC2-204ENST00000563945 H0YGG7 62 aa19.89■□□□□ 0.77
HERC2-204ENST00000563945 H3BMM5 538 aa19.89■□□□□ 0.77
HERC2-204ENST00000563945 PCDH17O14917 1159 aa19.89■□□□□ 0.77
HERC2-204ENST00000563945 PHF2O75151 1096 aa19.89■□□□□ 0.77
HERC2-204ENST00000563945 BMP10O95393 424 aa19.89■□□□□ 0.77
HERC2-204ENST00000563945 CRYABP02511 175 aaKnown RBP19.89■□□□□ 0.77
HERC2-204ENST00000563945 ICAM2P13598 275 aa19.89■□□□□ 0.77
HERC2-204ENST00000563945 ETS1P14921 441 aa19.89■□□□□ 0.77
HERC2-204ENST00000563945 RPS3P23396 243 aaKnown RBP eCLIP19.89■□□□□ 0.77
HERC2-204ENST00000563945 NPY2RP49146 381 aa19.89■□□□□ 0.77
HERC2-204ENST00000563945 TNFSF10P50591 281 aa19.89■□□□□ 0.77
HERC2-204ENST00000563945 EMP3P54852 163 aa19.89■□□□□ 0.77
HERC2-204ENST00000563945 ARF3P61204 181 aaPredicted RBP19.89■□□□□ 0.77
HERC2-204ENST00000563945 MRNIPQ6NTE8 343 aa19.89■□□□□ 0.77
HERC2-204ENST00000563945 FBXO42Q6P3S6 717 aa19.89■□□□□ 0.77
HERC2-204ENST00000563945 TMEM207Q6UWW9 146 aa19.89■□□□□ 0.77
HERC2-204ENST00000563945 LAPTM4BQ86VI4 370 aa19.89■□□□□ 0.77
HERC2-204ENST00000563945 CSNK1A1LQ8N752 337 aa19.89■□□□□ 0.77
HERC2-204ENST00000563945 OR9A1PQ8NGU1 263 aa19.89■□□□□ 0.77
HERC2-204ENST00000563945 RELTQ969Z4 430 aa19.89■□□□□ 0.77
HERC2-204ENST00000563945 MVB12AQ96EY5 273 aa19.89■□□□□ 0.77
HERC2-204ENST00000563945 MESP1Q9BRJ9 268 aa19.89■□□□□ 0.77
HERC2-204ENST00000563945 TRIM56Q9BRZ2 755 aaKnown RBP19.89■□□□□ 0.77
HERC2-204ENST00000563945 IL22Q9GZX6 179 aa19.89■□□□□ 0.77
HERC2-204ENST00000563945 IGLV3-12A0A075B6K2 115 aa19.88■□□□□ 0.77
HERC2-204ENST00000563945 ZNF839A8K0R7 811 aa19.88■□□□□ 0.77
HERC2-204ENST00000563945 CCNDBP1O95273 360 aa19.88■□□□□ 0.77
HERC2-204ENST00000563945 MED26O95402 600 aa19.88■□□□□ 0.77
HERC2-204ENST00000563945 COX6A1P12074 109 aa19.88■□□□□ 0.77
HERC2-204ENST00000563945 PKMP14618 531 aaKnown RBP19.88■□□□□ 0.77
HERC2-204ENST00000563945 CHRM3P20309 590 aa19.88■□□□□ 0.77
HERC2-204ENST00000563945 FMO4P31512 558 aa19.88■□□□□ 0.77
HERC2-204ENST00000563945 RBPJQ06330 500 aa19.88■□□□□ 0.77
HERC2-204ENST00000563945 DSG2Q14126 1118 aa19.88■□□□□ 0.77
HERC2-204ENST00000563945 RIPOR1Q6ZS17 1223 aa19.88■□□□□ 0.77
HERC2-204ENST00000563945 C10orf90Q96M02 699 aa19.88■□□□□ 0.77
HERC2-204ENST00000563945 UNKQ9C0B0 810 aaKnown RBP19.88■□□□□ 0.77
HERC2-204ENST00000563945 MKKSQ9NPJ1 570 aaPredicted RBP19.88■□□□□ 0.77
HERC2-204ENST00000563945 FAM114A2Q9NRY5 505 aa19.88■□□□□ 0.77
HERC2-204ENST00000563945 DRG1Q9Y295 367 aaKnown RBP19.88■□□□□ 0.77
HERC2-204ENST00000563945 MYO7BQ6PIF6 2116 aa19.87■□□□□ 0.77
HERC2-204ENST00000563945 A0A1W2PPV9 198 aa19.87■□□□□ 0.77
HERC2-204ENST00000563945 KRT87PA6NCN2 255 aa19.87■□□□□ 0.77
HERC2-204ENST00000563945 TXNDC9O14530 226 aa19.87■□□□□ 0.77
HERC2-204ENST00000563945 RASAL1O95294 804 aa19.87■□□□□ 0.77
HERC2-204ENST00000563945 SOX11P35716 441 aa19.87■□□□□ 0.77
HERC2-204ENST00000563945 ART3Q13508 389 aa19.87■□□□□ 0.77
HERC2-204ENST00000563945 FASTKQ14296 549 aaKnown RBP19.87■□□□□ 0.77
HERC2-204ENST00000563945 PRTGQ2VWP7 1150 aa19.87■□□□□ 0.77
HERC2-204ENST00000563945 RNF187Q5TA31 235 aaPredicted RBP19.87■□□□□ 0.77
HERC2-204ENST00000563945 ABHD17BQ5VST6 288 aa19.87■□□□□ 0.77
HERC2-204ENST00000563945 GARNL3Q5VVW2 1013 aa19.87■□□□□ 0.77
HERC2-204ENST00000563945 MTFR2Q6P444 385 aa19.87■□□□□ 0.77
HERC2-204ENST00000563945 C4orf22Q6V702 233 aa19.87■□□□□ 0.77
HERC2-204ENST00000563945 PRUNE1Q86TP1 453 aa19.87■□□□□ 0.77
HERC2-204ENST00000563945 SLC13A5Q86YT5 568 aaPredicted RBP19.87■□□□□ 0.77
HERC2-204ENST00000563945 MCEMP1Q8IX19 187 aa19.87■□□□□ 0.77
HERC2-204ENST00000563945 DNAJB8Q8NHS0 232 aa19.87■□□□□ 0.77
HERC2-204ENST00000563945 PLCD4Q9BRC7 762 aa19.87■□□□□ 0.77
HERC2-204ENST00000563945 TEKT2Q9UIF3 430 aa19.87■□□□□ 0.77
HERC2-204ENST00000563945 IGHV1-45A0A0A0MS14 117 aa19.86■□□□□ 0.77
HERC2-204ENST00000563945 E5RI56 91 aa19.86■□□□□ 0.77
HERC2-204ENST00000563945 FFAR3O14843 346 aa19.86■□□□□ 0.77
HERC2-204ENST00000563945 GPR42O15529 346 aa19.86■□□□□ 0.77
HERC2-204ENST00000563945 NRP2O60462 931 aa19.86■□□□□ 0.77
HERC2-204ENST00000563945 VAPBO95292 243 aa19.86■□□□□ 0.77
HERC2-204ENST00000563945 F10P00742 488 aa19.86■□□□□ 0.77
HERC2-204ENST00000563945 CATP04040 527 aaKnown RBP19.86■□□□□ 0.77
HERC2-204ENST00000563945 NMBRP28336 390 aa19.86■□□□□ 0.77
HERC2-204ENST00000563945 HSD17B2P37059 387 aa19.86■□□□□ 0.77
HERC2-204ENST00000563945 CASP6P55212 293 aa19.86■□□□□ 0.77
HERC2-204ENST00000563945 CRADDP78560 199 aa19.86■□□□□ 0.77
HERC2-204ENST00000563945 BASP1P80723 227 aaKnown RBP19.86■□□□□ 0.77
HERC2-204ENST00000563945 NDUFA9Q16795 377 aa19.86■□□□□ 0.77
HERC2-204ENST00000563945 LONRF1Q17RB8 773 aa19.86■□□□□ 0.77
HERC2-204ENST00000563945 ZNF324BQ6AW86 544 aaPredicted RBP19.86■□□□□ 0.77
HERC2-204ENST00000563945 LRRC8BQ6P9F7 803 aa19.86■□□□□ 0.77
HERC2-204ENST00000563945 SUSD1Q6UWL2 747 aa19.86■□□□□ 0.77
HERC2-204ENST00000563945 GSTA5Q7RTV2 222 aa19.86■□□□□ 0.77
HERC2-204ENST00000563945 ADCK2Q7Z695 626 aa19.86■□□□□ 0.77
HERC2-204ENST00000563945 METTL21AQ8WXB1 218 aa19.86■□□□□ 0.77
HERC2-204ENST00000563945 PSMF1Q92530 271 aa19.86■□□□□ 0.77
HERC2-204ENST00000563945 TAAR6Q96RI8 345 aa19.86■□□□□ 0.77
HERC2-204ENST00000563945 TREX1Q9NSU2 369 aa19.86■□□□□ 0.77
HERC2-204ENST00000563945 SEC14L3Q9UDX4 400 aa19.86■□□□□ 0.77
HERC2-204ENST00000563945 RUVBL1Q9Y265 456 aaKnown RBP19.86■□□□□ 0.77
HERC2-204ENST00000563945 CCL21O00585 134 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms